RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 MYRFQ9Y2G1 1151 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 PP2D1A8MPX8 630 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 FAM47E-STBD1D6RA91 191 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 PEX1O43933 1283 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 HSMCR30P0CW71 290 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 RARBP10826 455 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 MUTP22033 750 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 TPP2P29144 1249 aaPredicted RBP17.31■□□□□ 0.36
NID1-202ENST00000366595 RFC5P40937 340 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 DGKKQ5KSL6 1271 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 TBCELQ5QJ74 424 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 MZT2BQ6NZ67 158 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 SLC22A9Q8IVM8 553 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 MPP4Q96JB8 637 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 PHACTR1Q9C0D0 580 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 NCKIPSDQ9NZQ3 722 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 TUBE1Q9UJT0 475 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 GMEB1Q9Y692 573 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 FEN1P39748 380 aaKnown RBP17.31■□□□□ 0.36
NID1-202ENST00000366595 FXR1P51114 621 aaKnown RBP eCLIP17.31■□□□□ 0.36
NID1-202ENST00000366595 SLC34A1Q06495 639 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 RASA2Q15283 850 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 PLA2G4FQ68DD2 849 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 TMPRSS6Q8IU80 811 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 EID3Q8N140 333 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 DCP1AQ9NPI6 582 aaPredicted RBP17.31■□□□□ 0.36
NID1-202ENST00000366595 DUSP12Q9UNI6 340 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 ABCA5Q8WWZ7 1642 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 PDS5AQ29RF7 1337 aaKnown RBP17.31■□□□□ 0.36
NID1-202ENST00000366595 A0A087WXM4 84 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 SYNCRIPO60506 623 aaKnown RBP17.31■□□□□ 0.36
NID1-202ENST00000366595 ATP6V1G2O95670 118 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 TRAF2Q12933 501 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 PMF1Q6P1K2 205 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 KYQ8NBH2 561 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 C1orf50Q9BV19 199 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 COPS7BQ9H9Q2 264 aaPredicted RBP17.31■□□□□ 0.36
NID1-202ENST00000366595 AP3M1Q9Y2T2 418 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 CPSF1Q10570 1443 aaKnown RBP17.31■□□□□ 0.36
NID1-202ENST00000366595 SKAP2O75563 359 aaPredicted RBP17.31■□□□□ 0.36
NID1-202ENST00000366595 PPP2R1BP30154 601 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 RGS7P49802 495 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 GPSM2P81274 684 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 MAD2L1Q13257 205 aaPredicted RBP17.31■□□□□ 0.36
NID1-202ENST00000366595 NAIF1Q69YI7 327 aaPredicted RBP17.31■□□□□ 0.36
NID1-202ENST00000366595 KLHL24Q6TFL4 600 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 KCTD14Q9BQ13 255 aaPredicted RBP17.31■□□□□ 0.36
NID1-202ENST00000366595 SLAIN2Q9P270 581 aa17.31■□□□□ 0.36
NID1-202ENST00000366595 TKTP29401 623 aaKnown RBP17.3■□□□□ 0.36
NID1-202ENST00000366595 DCTN2Q13561 401 aaKnown RBP17.3■□□□□ 0.36
NID1-202ENST00000366595 IRGCQ6NXR0 463 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 RAD9BQ6WBX8 426 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 HS6ST3Q8IZP7 471 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 NEDD1Q8NHV4 660 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 MMP19Q99542 508 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 SDR42E2A6NKP2 422 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 MAGEB2O15479 319 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 CYP19A1P11511 503 aaPredicted RBP17.3■□□□□ 0.36
NID1-202ENST00000366595 TGM3Q08188 693 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 FAM71DQ8N9W8 422 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 MDM1Q8TC05 714 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 NARS2Q96I59 477 aaKnown RBP17.3■□□□□ 0.36
NID1-202ENST00000366595 ZSWIM1Q9BR11 485 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 NIF3L1Q9GZT8 377 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 LRRC40Q9H9A6 602 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 GSTM1P09488 218 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 PABPC1P11940 636 aaKnown RBP17.3■□□□□ 0.36
NID1-202ENST00000366595 CACNB2Q08289 660 aaPredicted RBP17.3■□□□□ 0.36
NID1-202ENST00000366595 OVGP1Q12889 678 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 CASP12Q6UXS9 341 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 MACC1Q6ZN28 852 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 ZNF335Q9H4Z2 1342 aaPredicted RBP17.3■□□□□ 0.36
NID1-202ENST00000366595 ATG7O95352 703 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 VAC14Q08AM6 782 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 ERO1BQ86YB8 467 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 MYO1HQ8N1T3 1032 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 ATP8B4Q8TF62 1192 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 C6orf62Q9GZU0 229 aaPredicted RBP17.3■□□□□ 0.36
NID1-202ENST00000366595 ZNF682O95780 498 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 ADARP55265 1226 aaKnown RBP17.3■□□□□ 0.36
NID1-202ENST00000366595 MFSD14CQ5VZR4 134 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 KIAA0408Q6ZU52 694 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 PEG10Q86TG7 708 aaKnown RBP17.3■□□□□ 0.36
NID1-202ENST00000366595 C11orf74Q86VG3 221 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 PPP1R10Q96QC0 940 aaKnown RBP17.3■□□□□ 0.36
NID1-202ENST00000366595 ERGIC2Q96RQ1 377 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 CELF4Q9BZC1 486 aaKnown RBP17.3■□□□□ 0.36
NID1-202ENST00000366595 AGPAT5Q9NUQ2 364 aa17.3■□□□□ 0.36
NID1-202ENST00000366595 MROH7-TTC4A0A0A0MT08 1334 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 MGAT4DA6NG13 374 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 F5H6K3 240 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 AQP5P55064 265 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 KLRC3Q07444 240 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 ATAD3BQ5T9A4 648 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 EXD1Q8NHP7 514 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 RPS6KL1Q9Y6S9 549 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 CNPP09543 421 aaKnown RBP17.29■□□□□ 0.36
NID1-202ENST00000366595 HOXD10P28358 340 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 YWHAZP63104 245 aaKnown RBP17.29■□□□□ 0.36
NID1-202ENST00000366595 NSMCE2Q96MF7 247 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms