RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 TMEM184CQ9NVA4 438 aa5.6□□□□□ -1.51
RNU4-40P-201ENST00000364351 SQORQ9Y6N5 450 aa5.6□□□□□ -1.51
RNU4-40P-201ENST00000364351 IL33O95760 270 aa5.59□□□□□ -1.51
RNU4-40P-201ENST00000364351 PRKAG1P54619 331 aa5.59□□□□□ -1.51
RNU4-40P-201ENST00000364351 MGAT5BQ3V5L5 792 aa5.59□□□□□ -1.51
RNU4-40P-201ENST00000364351 SFTPA1Q8IWL2 248 aa5.59□□□□□ -1.51
RNU4-40P-201ENST00000364351 TMEM171Q8WVE6 324 aa5.59□□□□□ -1.51
RNU4-40P-201ENST00000364351 MAP4K1Q92918 833 aa5.59□□□□□ -1.51
RNU4-40P-201ENST00000364351 CDK5RAP3Q96JB5 506 aa5.59□□□□□ -1.51
RNU4-40P-201ENST00000364351 MESP1Q9BRJ9 268 aa5.59□□□□□ -1.51
RNU4-40P-201ENST00000364351 GTPBP4Q9BZE4 634 aaKnown RBP5.59□□□□□ -1.51
RNU4-40P-201ENST00000364351 WASHC2CQ9Y4E1 1318 aa5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 ALG1L2C9J202 215 aa5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 PSMD9O00233 223 aa5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 MT-CO3P00414 261 aa5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 CRYABP02511 175 aaKnown RBP5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 XRCC6P12956 609 aaKnown RBP eCLIP5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 KCNA3P22001 575 aa5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 THBS3P49746 956 aa5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 COPB1P53618 953 aaKnown RBP5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 MLC1Q15049 377 aa5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 ZNF398Q8TD17 642 aa5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 MTFMTQ96DP5 389 aaKnown RBP5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 MVB12AQ96EY5 273 aa5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 C17orf80Q9BSJ5 609 aa5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 CNNM1Q9NRU3 951 aa5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 LPAR3Q9UBY5 353 aa5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 SPEF1Q9Y4P9 236 aa5.58□□□□□ -1.52
RNU4-40P-201ENST00000364351 ZMYM2Q9UBW7 1377 aa5.57□□□□□ -1.52
RNU4-40P-201ENST00000364351 THP07101 528 aa5.57□□□□□ -1.52
RNU4-40P-201ENST00000364351 GKP32189 559 aa5.57□□□□□ -1.52
RNU4-40P-201ENST00000364351 HTR6P50406 440 aa5.57□□□□□ -1.52
RNU4-40P-201ENST00000364351 NANOS2P60321 138 aaKnown RBP5.57□□□□□ -1.52
RNU4-40P-201ENST00000364351 SUMO2P61956 95 aaKnown RBP5.57□□□□□ -1.52
RNU4-40P-201ENST00000364351 ID2Q02363 134 aa5.57□□□□□ -1.52
RNU4-40P-201ENST00000364351 TMEM65Q6PI78 240 aa5.57□□□□□ -1.52
RNU4-40P-201ENST00000364351 C9orf47Q6ZRZ4 202 aa5.57□□□□□ -1.52
RNU4-40P-201ENST00000364351 SLC15A4Q8N697 577 aa5.57□□□□□ -1.52
RNU4-40P-201ENST00000364351 DNAJC5GQ8N7S2 189 aa5.57□□□□□ -1.52
RNU4-40P-201ENST00000364351 PNISRQ8TF01 805 aaKnown RBP5.57□□□□□ -1.52
RNU4-40P-201ENST00000364351 PPP2R3CQ969Q6 453 aa5.57□□□□□ -1.52
RNU4-40P-201ENST00000364351 RSPRY1Q96DX4 576 aa5.57□□□□□ -1.52
RNU4-40P-201ENST00000364351 LYZL4Q96KX0 146 aa5.57□□□□□ -1.52
RNU4-40P-201ENST00000364351 HEY2Q9UBP5 337 aa5.57□□□□□ -1.52
RNU4-40P-201ENST00000364351 MED16Q9Y2X0 877 aa5.57□□□□□ -1.52
RNU4-40P-201ENST00000364351 PMPCBO75439 489 aa5.56□□□□□ -1.52
RNU4-40P-201ENST00000364351 PSG1P11464 419 aa5.56□□□□□ -1.52
RNU4-40P-201ENST00000364351 PHKG2P15735 406 aa5.56□□□□□ -1.52
RNU4-40P-201ENST00000364351 WNT3P56703 355 aa5.56□□□□□ -1.52
RNU4-40P-201ENST00000364351 SEMA3AQ14563 771 aa5.56□□□□□ -1.52
RNU4-40P-201ENST00000364351 C4orf46Q504U0 113 aa5.56□□□□□ -1.52
RNU4-40P-201ENST00000364351 RNF187Q5TA31 235 aaPredicted RBP5.56□□□□□ -1.52
RNU4-40P-201ENST00000364351 PIP4P1Q86T03 277 aa5.56□□□□□ -1.52
RNU4-40P-201ENST00000364351 PIM3Q86V86 326 aa5.56□□□□□ -1.52
RNU4-40P-201ENST00000364351 ZNF548Q8NEK5 533 aaPredicted RBP5.56□□□□□ -1.52
RNU4-40P-201ENST00000364351 HSPBAP1Q96EW2 488 aa5.56□□□□□ -1.52
RNU4-40P-201ENST00000364351 P2RX7Q99572 595 aaKnown RBP5.56□□□□□ -1.52
RNU4-40P-201ENST00000364351 GBA2Q9HCG7 927 aaPredicted RBP5.56□□□□□ -1.52
RNU4-40P-201ENST00000364351 TLR2O60603 784 aa5.55□□□□□ -1.52
RNU4-40P-201ENST00000364351 ALDH2P05091 517 aa5.55□□□□□ -1.52
RNU4-40P-201ENST00000364351 ME1P48163 572 aa5.55□□□□□ -1.52
RNU4-40P-201ENST00000364351 LMAN2Q12907 356 aa5.55□□□□□ -1.52
RNU4-40P-201ENST00000364351 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.55□□□□□ -1.52
RNU4-40P-201ENST00000364351 PLBD2Q8NHP8 589 aa5.55□□□□□ -1.52
RNU4-40P-201ENST00000364351 BPIFB1Q8TDL5 484 aa5.55□□□□□ -1.52
RNU4-40P-201ENST00000364351 CGRRF1Q99675 332 aa5.55□□□□□ -1.52
RNU4-40P-201ENST00000364351 ASPSCR1Q9BZE9 553 aa5.55□□□□□ -1.52
RNU4-40P-201ENST00000364351 STAP2Q9UGK3 403 aa5.55□□□□□ -1.52
RNU4-40P-201ENST00000364351 FAM90A8PA6NJQ4 464 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 FAM90A13PP0C7W8 464 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 FAM90A24PP0C7X0 464 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 AMPD3Q01432 767 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 ERV3-1Q14264 604 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 SEC23BQ15437 767 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 PTCHD3Q3KNS1 767 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 PLA1AQ53H76 456 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 TMTC4Q5T4D3 741 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 PTCHD4Q6ZW05 846 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 GAS2L3Q86XJ1 694 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 ANKRD13BQ86YJ7 626 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 LIX1LQ8IVB5 337 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 RAPGEF4Q8WZA2 1011 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 MRGPRX1Q96LB2 322 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 HIPK2Q9H2X6 1198 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 ZSCAN32Q9NX65 697 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 STXBP5LQ9Y2K9 1186 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 HS3ST3B1Q9Y662 390 aa5.54□□□□□ -1.52
RNU4-40P-201ENST00000364351 APEHP13798 732 aaKnown RBP5.53□□□□□ -1.52
RNU4-40P-201ENST00000364351 AKAP5P24588 427 aa5.53□□□□□ -1.52
RNU4-40P-201ENST00000364351 TMEM240Q5SV17 173 aa5.53□□□□□ -1.52
RNU4-40P-201ENST00000364351 CERCAMQ5T4B2 595 aa5.53□□□□□ -1.52
RNU4-40P-201ENST00000364351 LMBRD2Q68DH5 695 aaPredicted RBP5.53□□□□□ -1.52
RNU4-40P-201ENST00000364351 ANO7Q6IWH7 933 aa5.53□□□□□ -1.52
RNU4-40P-201ENST00000364351 RANBP10Q6VN20 620 aa5.53□□□□□ -1.52
RNU4-40P-201ENST00000364351 COLCA1Q6ZS62 124 aa5.53□□□□□ -1.52
RNU4-40P-201ENST00000364351 RAB11FIP4Q86YS3 637 aa5.53□□□□□ -1.52
RNU4-40P-201ENST00000364351 GRAMD1CQ8IYS0 662 aa5.53□□□□□ -1.52
RNU4-40P-201ENST00000364351 SPARTQ8N0X7 666 aa5.53□□□□□ -1.52
RNU4-40P-201ENST00000364351 MAP3K14Q99558 947 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms