RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TAF5Q15542 800 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 GEN1Q17RS7 908 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 FBXO47Q5MNV8 452 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 VPS53Q5VIR6 699 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 ABLIM2Q6H8Q1 611 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 RGS7BPQ6MZT1 257 aaPredicted RBP4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 MOGAT3Q86VF5 341 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 TMPRSS6Q8IU80 811 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 RASGRP3Q8IV61 690 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 SLC44A2Q8IWA5 706 aaPredicted RBP4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 TEX19Q8NA77 164 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 OR1N1Q8NGS0 311 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 MBD3L2Q8NHZ7 208 aaPredicted RBP4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 CPT1CQ8TCG5 803 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 ZSCAN31Q96LW9 406 aaPredicted RBP4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 RTKNQ9BST9 563 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 FAM167BQ9BTA0 163 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 AMBRA1Q9C0C7 1298 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 ZCWPW1Q9H0M4 648 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 PABPC3Q9H361 631 aaKnown RBP4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 MLXIPQ9HAP2 919 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 GALNT9Q9HCQ5 603 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 SAYSD1Q9NPB0 183 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 AKIP1Q9NQ31 210 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 PRDM8Q9NQV8 689 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 RRN3Q9NYV6 651 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 ADM5C9JUS6 153 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 FCHO1O14526 889 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 DNPH1O43598 174 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 ACTL6BO94805 426 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 VIPP01282 170 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 SRGNP10124 158 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 HGFP14210 728 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 GATA3P23771 443 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 PRKAR1BP31321 381 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 UQCRC1P31930 480 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 ADD2P35612 726 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 BMPR1AP36894 532 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 PDE6CP51160 858 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 PGDP52209 483 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 ALDH18A1P54886 795 aaKnown RBP4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 AP2B1P63010 937 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 GPS1Q13098 491 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 TIGD6Q17RP2 521 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 BEAN1Q3B7T3 259 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 TRIM60Q495X7 471 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 SPDYE7PQ495Y7 208 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 PREPLQ4J6C6 727 aaPredicted RBP4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 TMED8Q6PL24 325 aaPredicted RBP4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 KLHL17Q6TDP4 642 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 COLGALT2Q8IYK4 626 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 NRSN1Q8IZ57 195 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 ABRAQ8N0Z2 381 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 ABHD5Q8WTS1 349 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 USP13Q92995 863 aaPredicted RBP4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 TMEM125Q96AQ2 219 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 FAM136AQ96C01 138 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 WDR24Q96S15 920 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 ADOQ96SZ5 270 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 NUDT22Q9BRQ3 303 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 ALOXE3Q9BYJ1 711 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 ZNF768Q9H5H4 540 aaKnown RBP4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 UNKLQ9H9P5 680 aaKnown RBP4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 INTS13Q9NVM9 706 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 KIF17Q9P2E2 1029 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 DKK2Q9UBU2 259 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 LPAR3Q9UBY5 353 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 NOX1Q9Y5S8 564 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 COL15A1P39059 1388 aa4.35□□□□□ -1.71
RNU6-28P-201ENST00000362378 ZAR1LA6NP61 321 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 EIF3FO00303 357 aaPredicted RBP4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 NCR1O76036 304 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 USP1O94782 785 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 SRGAP2BP0DMP2 458 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 ADORA2AP29274 412 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 EPHA3P29320 983 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 SELENOPP49908 381 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 GATMP50440 423 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 PRKD1Q15139 912 aaPredicted RBP4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 ADCK5Q3MIX3 580 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 ATPAF1Q5TC12 328 aaPredicted RBP4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 DTX2Q86UW9 622 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 HERC6Q8IVU3 1022 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 CCDC117Q8IWD4 279 aaPredicted RBP4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 FTSJ3Q8IY81 847 aaKnown RBP4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 CLASRPQ8N2M8 674 aaKnown RBP4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 TTC9BQ8N6N2 239 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 SCAMP5Q8TAC9 235 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 TMEM171Q8WVE6 324 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 THAP4Q8WY91 577 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 SDCCAG3Q96C92 435 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 GRAMD1AQ96CP6 724 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 RNF31Q96EP0 1072 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 HIST1H2AAQ96QV6 131 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 INO80BQ9C086 356 aaPredicted RBP4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 ZNF703Q9H7S9 590 aaPredicted RBP4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 PRDM16Q9HAZ2 1276 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 SERTAD3Q9UJW9 196 aa4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 CNOT11Q9UKZ1 510 aaKnown RBP4.34□□□□□ -1.71
RNU6-28P-201ENST00000362378 PNMA2Q9UL42 364 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms