RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 CDKL3Q8IVW4 592 aaPredicted RBP11.67□□□□□ -0.54
SSU72-202ENST00000359060 UNC45BQ8IWX7 931 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 TMEM130Q8N3G9 435 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 RBPJLQ9UBG7 517 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 PGAP2Q9UHJ9 254 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 SRRM3A6NNA2 597 aaPredicted RBP11.67□□□□□ -0.54
SSU72-202ENST00000359060 B4GALT4O60513 344 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 STBD1O95210 358 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 HOXC6P09630 235 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 ATICP31939 592 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 OGDHQ02218 1023 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 TRIM68Q6AZZ1 485 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 C15orf39Q6ZRI6 1047 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 TSHZ1Q6ZSZ6 1077 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 CYP4X1Q8N118 509 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 FAM111AQ96PZ2 611 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 ELOVL4Q9GZR5 314 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 KDM4CQ9H3R0 1056 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 HMGXB4Q9UGU5 601 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 PPME1Q9Y570 386 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 USH1CQ9Y6N9 552 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 TRIM49D1C9J1S8 452 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 CDKN2BP42772 138 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 PDZD4Q76G19 769 aaPredicted RBP11.66□□□□□ -0.54
SSU72-202ENST00000359060 C2orf69Q8N8R5 385 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 ATXN7L3BQ96GX2 97 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 ZNF560Q96MR9 790 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 MARCOQ9UEW3 520 aaPredicted RBP11.66□□□□□ -0.54
SSU72-202ENST00000359060 INPP5FQ9Y2H2 1132 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 CFAP73A6NFT4 308 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 HMGCRP04035 888 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 EDN1P05305 212 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 SULT1E1P49888 294 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 ARFIP2P53365 341 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 RAD23BP54727 409 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 NRLP54845 237 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 TMEM63BQ5T3F8 832 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 PID1Q7Z2X4 250 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 YTHDF3Q7Z739 585 aaKnown RBP11.66□□□□□ -0.54
SSU72-202ENST00000359060 KCNV2Q8TDN2 545 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 CKAP2Q8WWK9 683 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 SLCO1B3Q9NPD5 702 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 STYXL1Q9Y6J8 313 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 MYH9P35579 1960 aaKnown RBP11.66□□□□□ -0.54
SSU72-202ENST00000359060 APOC4-APOC2K7ER74 178 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 APOC2P02655 101 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 CETPP11597 493 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 RPA3P35244 121 aaPredicted RBP11.66□□□□□ -0.54
SSU72-202ENST00000359060 PPIL2Q13356 520 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 SIX1Q15475 284 aaPredicted RBP11.66□□□□□ -0.54
SSU72-202ENST00000359060 NOL9Q5SY16 702 aaKnown RBP11.66□□□□□ -0.54
SSU72-202ENST00000359060 MROH9Q5TGP6 573 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 FAM183BPQ6ZVS7 135 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 BBS12Q6ZW61 710 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 KAT2BQ92831 832 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 TNIP3Q96KP6 325 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 PIH1D1Q9NWS0 290 aaKnown RBP11.66□□□□□ -0.54
SSU72-202ENST00000359060 PPARGC1AQ9UBK2 798 aaKnown RBP11.66□□□□□ -0.54
SSU72-202ENST00000359060 ITGA11Q9UKX5 1188 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 DRG1Q9Y295 367 aaKnown RBP11.66□□□□□ -0.54
SSU72-202ENST00000359060 SRCAPQ6ZRS2 3230 aa11.66□□□□□ -0.54
SSU72-202ENST00000359060 SPDYE5A6NIY4 337 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 DNM1LO00429 736 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 ATG7O95352 703 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 ESRRAP11474 423 aaPredicted RBP11.65□□□□□ -0.54
SSU72-202ENST00000359060 TARSP26639 723 aaKnown RBP11.65□□□□□ -0.54
SSU72-202ENST00000359060 ERFP50548 548 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 PTP4A2Q12974 167 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 ZC3H12AQ5D1E8 599 aaKnown RBP11.65□□□□□ -0.54
SSU72-202ENST00000359060 SH3D19Q5HYK7 790 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 PRAMEF19Q5SWL8 479 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 MFSD5Q6N075 450 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 TWNKQ96RR1 684 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 NCAPGQ9BPX3 1015 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 CEP41Q9BYV8 373 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 SPC25Q9HBM1 224 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 ARFGEF1Q9Y6D6 1849 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 A0A1W2PPM1 405 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 E2F8A0AVK6 867 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 KBTBD13C9JR72 458 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 RBL1P28749 1068 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 DNAJB3Q8WWF6 145 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 TSSK1BQ9BXA7 367 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 B3GNT5Q9BYG0 378 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 PCMTD2Q9NV79 361 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 KIAA1257Q9ULG3 409 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 STAP1Q9ULZ2 295 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 CCDC78A2IDD5 438 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 ITGAVP06756 1048 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 ACAT1P24752 427 aaKnown RBP11.65□□□□□ -0.54
SSU72-202ENST00000359060 MBTD1Q05BQ5 628 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 DPYSL3Q14195 570 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 EFTUD2Q15029 972 aaKnown RBP eCLIP11.65□□□□□ -0.54
SSU72-202ENST00000359060 TCEAL1Q15170 157 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 TARBP2Q15633 366 aaKnown RBP11.65□□□□□ -0.54
SSU72-202ENST00000359060 SCARA3Q6AZY7 606 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 LRRC6Q86X45 466 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 NUDCD3Q8IVD9 361 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 FUKQ8N0W3 1084 aa11.65□□□□□ -0.54
SSU72-202ENST00000359060 ATXN2LQ8WWM7 1075 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms