RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 SENP8Q96LD8 212 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 KRT12Q99456 494 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 HNRNPABQ99729 332 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 MRPL45Q9BRJ2 306 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 MRPL9Q9BYD2 267 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 FRMD8P1Q9BZ68 369 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 FAM114A2Q9NRY5 505 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 RBM12Q9NTZ6 932 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 TMEM161AQ9NX61 479 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 LRFN2Q9ULH4 789 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 MRPL42Q9Y6G3 142 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 GOLGA8SH3BPF8 625 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 PHF2O75151 1096 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 FBXO21O94952 628 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 TJP3O95049 919 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 PTPN1P18031 435 aaKnown RBP11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 GPD1P21695 349 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 DNAJB1P25685 340 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 PCK1P35558 622 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 FNTAP49354 379 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 SCNN1GP51170 649 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 CLCN6P51797 869 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 FAM189BP81408 668 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 RBM10P98175 930 aaKnown RBP11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 TSPY1Q01534 308 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 RNASELQ05823 741 aaKnown RBP11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 NNTQ13423 1086 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 NAA30Q147X3 362 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 UPP1Q16831 310 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 PTPN20Q4JDL3 420 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 PAN2Q504Q3 1202 aaKnown RBP11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 PPP1R15BQ5SWA1 713 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 OR6B2Q6IFH4 312 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 CC2D1AQ6P1N0 951 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 CEP128Q6ZU80 1094 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 TMEM110Q86TL2 294 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 XYLT1Q86Y38 959 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 LRRN4CLQ8ND94 238 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 CCHCR1Q8TD31 782 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 ADAMTS19Q8TE59 1207 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 CLP1Q92989 425 aaKnown RBP11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 ZFP42Q96MM3 310 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 TWNKQ96RR1 684 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 CNPY3Q9BT09 278 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 MED10Q9BTT4 135 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 SLC4A5Q9BY07 1137 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 OXCT2Q9BYC2 517 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 UBXN6Q9BZV1 441 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 GOLPH3Q9H4A6 298 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 RNF19AQ9NV58 838 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 LMCD1Q9NZU5 365 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 L1RE1Q9UN81 338 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 USTQ9Y2C2 406 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 EFR3BQ9Y2G0 817 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 PCDHB7Q9Y5E2 793 aa11.29□□□□□ -0.6
TRAPPC4-201ENST00000359005 COL4A6Q14031 1691 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 C9IYK1 514 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 GABRDO14764 452 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 XPO1O14980 1071 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 ZNF189O75820 626 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 B3GAT3O94766 335 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 HEXIM1O94992 359 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 CSPG5O95196 566 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 GAS8O95995 478 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 CALCAP01258 141 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 CYP11A1P05108 521 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 GLI1P08151 1106 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 PDGFRBP09619 1106 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 FAM200BP0CF97 657 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 TYMPP19971 482 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 SDC4P31431 198 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 PLA2G4AP47712 749 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 ZNF143P52747 638 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 RNASE9P60153 205 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 DR1Q01658 176 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 SLC6A3Q01959 620 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 PLCB3Q01970 1234 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 SOX4Q06945 474 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 ELAVL2Q12926 359 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 BTG3Q14201 252 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 TCEAL5Q5H9L2 206 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 NOMO2Q5JPE7 1267 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 PPP1R26Q5T8A7 1209 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 SLC13A5Q86YT5 568 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 KLHL7Q8IXQ5 586 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 FIBCD1Q8N539 461 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 WDTC1Q8N5D0 677 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 TTC13Q8NBP0 860 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 KBTBD7Q8WVZ9 684 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 HLA-CQ95604 372 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 MRPL38Q96DV4 380 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 CPXM1Q96SM3 734 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 TBCBQ99426 244 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 ACBD6Q9BR61 282 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 LRRC1Q9BTT6 524 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 DUSP16Q9BY84 665 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 TSPYL1Q9H0U9 437 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 PRDM16Q9HAZ2 1276 aa11.28□□□□□ -0.6
TRAPPC4-201ENST00000359005 LRRC4Q9HBW1 653 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms