RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 ATL2Q8NHH9 583 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 TRIM7Q9C029 511 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 DDX47Q9H0S4 455 aaKnown RBP13.94□□□□□ -0.18
NFIX-201ENST00000358552 LRRC4Q9HBW1 653 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 EPB41L5Q9HCM4 733 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 LRFN2Q9ULH4 789 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 PCDHB8Q9UN66 801 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 CASTOR2A6NHX0 329 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 ZNF487B1APH4 448 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 ENPP3O14638 875 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 GAS8O95995 478 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 MARCKSL1P49006 195 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 RNASELQ05823 741 aaKnown RBP13.93□□□□□ -0.18
NFIX-201ENST00000358552 SMARCB1Q12824 385 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 PDK2Q15119 407 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 TIGD5Q53EQ6 642 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 CCDC137Q6PK04 289 aaKnown RBP13.93□□□□□ -0.18
NFIX-201ENST00000358552 C4orf50Q6ZRC1 276 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 FAM183BPQ6ZVS7 135 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 RTN4RL1Q86UN2 441 aaPredicted RBP13.93□□□□□ -0.18
NFIX-201ENST00000358552 PSTKQ8IV42 348 aaKnown RBP13.93□□□□□ -0.18
NFIX-201ENST00000358552 SCML4Q8N228 414 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 PRELID2Q8N945 189 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 TEKT4Q8WW24 435 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 SMARCD1Q96GM5 515 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 SH3GL2Q99962 352 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 ERP44Q9BS26 406 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 MED10Q9BTT4 135 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 DPEP3Q9H4B8 488 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 INPP5FQ9Y2H2 1132 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 PRPSAP2O60256 369 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 SHOX2O60902 331 aaPredicted RBP13.93□□□□□ -0.18
NFIX-201ENST00000358552 LRCH4O75427 683 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 ADORA2BP29275 332 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 COILP38432 576 aaPredicted RBP13.93□□□□□ -0.18
NFIX-201ENST00000358552 GGCXP38435 758 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 FAM171BQ6P995 826 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 OSTM1Q86WC4 334 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 SPATS2Q86XZ4 545 aaKnown RBP13.93□□□□□ -0.18
NFIX-201ENST00000358552 CCDC105Q8IYK2 499 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 FUKQ8N0W3 1084 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 BBOF1Q8ND07 529 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 CMASQ8NFW8 434 aaPredicted RBP13.93□□□□□ -0.18
NFIX-201ENST00000358552 RXFP2Q8WXD0 754 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 LRRC45Q96CN5 670 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 SLITRK1Q96PX8 696 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 TMEM175Q9BSA9 504 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 COLEC11Q9BWP8 271 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 CNGB3Q9NQW8 809 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 AMACRQ9UHK6 382 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 USP18Q9UMW8 372 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 NME7Q9Y5B8 376 aa13.93□□□□□ -0.18
NFIX-201ENST00000358552 MKI67P46013 3256 aaKnown RBP13.92□□□□□ -0.18
NFIX-201ENST00000358552 BHMG1C9JSJ3 638 aaPredicted RBP13.92□□□□□ -0.18
NFIX-201ENST00000358552 PAPSS1O43252 624 aaPredicted RBP13.92□□□□□ -0.18
NFIX-201ENST00000358552 ZNF189O75820 626 aaPredicted RBP13.92□□□□□ -0.18
NFIX-201ENST00000358552 ECEL1O95672 775 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 KRT1P04264 644 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 ALDH2P05091 517 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 RARAP10276 462 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 CCDC130P13994 396 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 TAS2R40P59535 323 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 ZNF252P-AS1Q0IIN9 211 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 KLF1Q13351 362 aaPredicted RBP13.92□□□□□ -0.18
NFIX-201ENST00000358552 INTS6LQ5JSJ4 861 aaKnown RBP13.92□□□□□ -0.18
NFIX-201ENST00000358552 SPDYCQ5MJ68 293 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 OVOS1Q6IE37 1185 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 LLGL2Q6P1M3 1020 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 CEP128Q6ZU80 1094 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 STRADAQ7RTN6 431 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 COLGALT2Q8IYK4 626 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 DCP1BQ8IZD4 617 aaKnown RBP13.92□□□□□ -0.18
NFIX-201ENST00000358552 SIX6OS1Q8N1H7 587 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 TMEM130Q8N3G9 435 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 DBF4BQ8NFT6 615 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 IRGQQ8WZA9 623 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 HIPK3Q9H422 1215 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 CSNK1G1Q9HCP0 422 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 STAP1Q9ULZ2 295 aa13.92□□□□□ -0.18
NFIX-201ENST00000358552 DRG1Q9Y295 367 aaKnown RBP13.92□□□□□ -0.18
NFIX-201ENST00000358552 SRRM3A6NNA2 597 aaPredicted RBP13.91□□□□□ -0.18
NFIX-201ENST00000358552 MDM4O15151 490 aa13.91□□□□□ -0.18
NFIX-201ENST00000358552 NBNO60934 754 aa13.91□□□□□ -0.18
NFIX-201ENST00000358552 EFCAB14O75071 495 aa13.91□□□□□ -0.18
NFIX-201ENST00000358552 OAZ2O95190 189 aa13.91□□□□□ -0.18
NFIX-201ENST00000358552 TRUB2O95900 331 aaKnown RBP13.91□□□□□ -0.18
NFIX-201ENST00000358552 RALAP11233 206 aa13.91□□□□□ -0.18
NFIX-201ENST00000358552 RDXP35241 583 aaKnown RBP13.91□□□□□ -0.18
NFIX-201ENST00000358552 ATN1P54259 1190 aaPredicted RBP13.91□□□□□ -0.18
NFIX-201ENST00000358552 AIF1P55008 147 aa13.91□□□□□ -0.18
NFIX-201ENST00000358552 SLC7A5Q01650 507 aa13.91□□□□□ -0.18
NFIX-201ENST00000358552 OGDHQ02218 1023 aa13.91□□□□□ -0.18
NFIX-201ENST00000358552 SLC25A11Q02978 314 aaKnown RBP13.91□□□□□ -0.18
NFIX-201ENST00000358552 CAV1Q03135 178 aa13.91□□□□□ -0.18
NFIX-201ENST00000358552 YWHAHQ04917 246 aaPredicted RBP13.91□□□□□ -0.18
NFIX-201ENST00000358552 TFDP2Q14188 446 aa13.91□□□□□ -0.18
NFIX-201ENST00000358552 NFE2Q16621 373 aaPredicted RBP13.91□□□□□ -0.18
NFIX-201ENST00000358552 DNAJC21Q5F1R6 531 aaKnown RBP13.91□□□□□ -0.18
NFIX-201ENST00000358552 MDH1BQ5I0G3 518 aa13.91□□□□□ -0.18
NFIX-201ENST00000358552 CFAP58Q5T655 872 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms