RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 NME3Q13232 169 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 PDK1Q15118 436 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 KLHL17Q6TDP4 642 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 LINC00523Q86TU6 105 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 KRT73Q86Y46 540 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 KCTD17Q8N5Z5 321 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 MARCH10Q8NA82 808 aaPredicted RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 UBASH3BQ8TF42 649 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 IARS2Q9NSE4 1012 aaKnown RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 H7C1W4 665 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 ADCY6O43306 1168 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 IDH3BO43837 385 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 CD44P16070 742 aaKnown RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 TGM2P21980 687 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 TSEN2Q8NCE0 465 aaKnown RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 WDR12Q9GZL7 423 aaKnown RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 NMRK1Q9NWW6 199 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 SLC39A10Q9ULF5 831 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 ADGRB3O60242 1522 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 GDF11O95390 407 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 RBP3P10745 1247 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 FDPSP14324 419 aaKnown RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 KRT20P35900 424 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 FXR2P51116 673 aaKnown RBP eCLIP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 BFSP2Q13515 415 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 DDR2Q16832 855 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 TTI2Q6NXR4 508 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 ERO1BQ86YB8 467 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 ATP8B4Q8TF62 1192 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 HDAC7Q8WUI4 952 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 SEC31BQ9NQW1 1179 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 SPATA2Q9UM82 520 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 MAP3K13O43283 966 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 MTSS1O43312 755 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 PHKA2P46019 1235 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 SLC26A11Q86WA9 606 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 ZNF75CPQ92670 426 aaPredicted RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 SPRTNQ9H040 489 aaPredicted RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 TOPORSQ9NS56 1045 aaPredicted RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 C6orf203Q9P0P8 240 aaPredicted RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 CST8O60676 142 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 GZMAP12544 262 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 FCHO2Q0JRZ9 810 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 MTM1Q13496 603 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 CCNJLQ8IV13 435 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 ZNF398Q8TD17 642 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 SH3RF3Q8TEJ3 882 aaPredicted RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 BTN2A2Q8WVV5 523 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 DGCR14Q96DF8 476 aaKnown RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 TBC1D10AQ9BXI6 508 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 BTBD3Q9Y2F9 522 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 TMEM2Q9UHN6 1383 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 E2F8A0AVK6 867 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 ATP6V1B2P21281 511 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 FDFT1P37268 417 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 IFI35P80217 286 aaPredicted RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 XIAPP98170 497 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 LPIN1Q14693 890 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 CCDC153Q494R4 210 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 RBM44Q6ZP01 1051 aaKnown RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 TLR10Q9BXR5 811 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 GALNT8Q9NY28 637 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 UBA2Q9UBT2 640 aaPredicted RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 LOXHD1Q8IVV2 1947 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 BAZ2AQ9UIF9 1905 aaKnown RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 ADGRB2O60241 1585 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 H3BNX3 289 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 ZNF263O14978 683 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 PEX1O43933 1283 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 SNX3O60493 162 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 ALOX5P09917 674 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 SOX11P35716 441 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 AGAP9Q5VTM2 703 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 OR7A2PQ8NGA2 310 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 SRPK1Q96SB4 655 aaKnown RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 KCTD14Q9BQ13 255 aaPredicted RBP9.07□□□□□ -0.96
COL6A6-201ENST00000358511 LRMDAQ9H2I8 198 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 SQORQ9Y6N5 450 aa9.07□□□□□ -0.96
COL6A6-201ENST00000358511 FMN2Q9NZ56 1722 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 MYOM1P52179 1685 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 DEPDC5O75140 1603 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 ERVK-9P63128 1117 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 IKBIPQ70UQ0 350 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 ATPAF2Q8N5M1 289 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 EXD1Q8NHP7 514 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 DNAJC16Q9Y2G8 782 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 ALKQ9UM73 1620 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 IL6P05231 212 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 YWHABP31946 246 aaKnown RBP9.06□□□□□ -0.96
COL6A6-201ENST00000358511 CRKLP46109 303 aaKnown RBP9.06□□□□□ -0.96
COL6A6-201ENST00000358511 SLC1A6P48664 564 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 BNIPLQ7Z465 357 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 PAGR1Q9BTK6 254 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 HUS1O60921 280 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 PURAQ00577 322 aaKnown RBP9.06□□□□□ -0.96
COL6A6-201ENST00000358511 PTK6Q13882 451 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 FAM45BPQ6NSW5 357 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 THNSL1Q8IYQ7 743 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 SIX5Q8N196 739 aa9.06□□□□□ -0.96
COL6A6-201ENST00000358511 RTL3Q8N8U3 475 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms