RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 CCND1P24385 295 aa21.37■■□□□ 1.01
COL13A1-202ENST00000357811 PTK7Q13308 1070 aa21.37■■□□□ 1.01
COL13A1-202ENST00000357811 NETO2Q8NC67 525 aa21.37■■□□□ 1.01
COL13A1-202ENST00000357811 FAM13CQ8NE31 585 aa21.37■■□□□ 1.01
COL13A1-202ENST00000357811 DCAKDQ8WVC6 231 aa21.37■■□□□ 1.01
COL13A1-202ENST00000357811 SLC7A6OSQ96CW6 309 aaPredicted RBP21.37■■□□□ 1.01
COL13A1-202ENST00000357811 MAGEB5Q9BZ81 275 aa21.37■■□□□ 1.01
COL13A1-202ENST00000357811 ZNF518BQ9C0D4 1074 aa21.37■■□□□ 1.01
COL13A1-202ENST00000357811 NGRNQ9NPE2 291 aaKnown RBP21.37■■□□□ 1.01
COL13A1-202ENST00000357811 RAB6BQ9NRW1 208 aa21.37■■□□□ 1.01
COL13A1-202ENST00000357811 EVPLQ92817 2033 aa21.37■■□□□ 1.01
COL13A1-202ENST00000357811 TCRBV9S1A1TA0A576 114 aa21.37■■□□□ 1.01
COL13A1-202ENST00000357811 LPXNO60711 386 aa21.37■■□□□ 1.01
COL13A1-202ENST00000357811 ALADP13716 330 aa21.37■■□□□ 1.01
COL13A1-202ENST00000357811 ATP2A2P16615 1042 aaKnown RBP21.37■■□□□ 1.01
COL13A1-202ENST00000357811 PTPN11Q06124 597 aaPredicted RBP21.37■■□□□ 1.01
COL13A1-202ENST00000357811 ZC3H12AQ5D1E8 599 aaKnown RBP21.37■■□□□ 1.01
COL13A1-202ENST00000357811 TRNP1Q6NT89 227 aa21.37■■□□□ 1.01
COL13A1-202ENST00000357811 ACSS3Q9H6R3 686 aa21.37■■□□□ 1.01
COL13A1-202ENST00000357811 PDGFCQ9NRA1 345 aa21.37■■□□□ 1.01
COL13A1-202ENST00000357811 GINS2Q9Y248 185 aa21.37■■□□□ 1.01
COL13A1-202ENST00000357811 MAGEB2O15479 319 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 BGNP21810 368 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 CCDC142Q17RM4 750 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 MAP1SQ66K74 1059 aaPredicted RBP21.36■■□□□ 1.01
COL13A1-202ENST00000357811 RFX8Q6ZV50 586 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 PPM1NQ8N819 430 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 NIPA2Q8N8Q9 360 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 FAF2Q96CS3 445 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 MECRQ9BV79 373 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 PDGFRAP16234 1089 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 RPS12P25398 132 aaKnown RBP21.36■■□□□ 1.01
COL13A1-202ENST00000357811 YY1P25490 414 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 TAP1Q03518 808 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 PPP6R3Q5H9R7 873 aaPredicted RBP21.36■■□□□ 1.01
COL13A1-202ENST00000357811 CHST13Q8NET6 341 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.36■■□□□ 1.01
COL13A1-202ENST00000357811 VPS33BQ9H267 617 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 MANSC1Q9H8J5 431 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 ZNF395Q9H8N7 513 aaPredicted RBP21.36■■□□□ 1.01
COL13A1-202ENST00000357811 PARP14Q460N5 1801 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 CCDC195A0A1B0GUA6 201 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 E5RJQ4 531 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 AP3M2P53677 418 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 ANKRD20A2Q5SQ80 823 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 ANKRD20A1Q5TYW2 823 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 ANKRD20A3Q5VUR7 823 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 FYB2Q5VWT5 728 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 PPP1R2P3Q6NXS1 205 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 LBX2Q6XYB7 198 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 AGGF1Q8N302 714 aaeCLIP21.36■■□□□ 1.01
COL13A1-202ENST00000357811 RXFP2Q8WXD0 754 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 GPR20Q99678 358 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 LPIN3Q9BQK8 851 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 SLC13A1Q9BZW2 595 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 SPATC1LQ9H0A9 340 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 RNPEPQ9H4A4 650 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 SENP1Q9P0U3 644 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 KANSL3Q9P2N6 904 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 HEY2Q9UBP5 337 aa21.36■■□□□ 1.01
COL13A1-202ENST00000357811 KCNN4O15554 427 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 UGT1A9O60656 530 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 DCTN3O75935 186 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 PAX7P23759 505 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 SATB1Q01826 763 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 ROR1Q01973 937 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 ZBTB16Q05516 673 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 BMPR2Q13873 1038 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 RFWD3Q6PCD5 774 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 ADGRD1Q6QNK2 874 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 POLNQ7Z5Q5 900 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 TTC7BQ86TV6 843 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 MIEF2Q96C03 454 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 OTUD5Q96G74 571 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 UGT1A7Q9HAW7 530 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 UGT1A10Q9HAW8 530 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 UGT1A8Q9HAW9 530 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 ARMCX1Q9P291 453 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 TRUB2O95900 331 aaKnown RBP21.35■■□□□ 1.01
COL13A1-202ENST00000357811 INHBAP08476 426 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 STAG3L1P0CL83 205 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 CDH5P33151 784 aaPredicted RBP21.35■■□□□ 1.01
COL13A1-202ENST00000357811 MXD4Q14582 209 aaPredicted RBP21.35■■□□□ 1.01
COL13A1-202ENST00000357811 MOB2Q70IA6 237 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 PCGF5Q86SE9 256 aa21.35■■□□□ 1.01
COL13A1-202ENST00000357811 RAB3IPQ96QF0 476 aaPredicted RBP21.35■■□□□ 1.01
COL13A1-202ENST00000357811 CCDC189A1A4V9 331 aa21.34■■□□□ 1.01
COL13A1-202ENST00000357811 VTNP04004 478 aa21.34■■□□□ 1.01
COL13A1-202ENST00000357811 APRTP07741 180 aa21.34■■□□□ 1.01
COL13A1-202ENST00000357811 CPA2P48052 419 aa21.34■■□□□ 1.01
COL13A1-202ENST00000357811 IRX4P78413 519 aa21.34■■□□□ 1.01
COL13A1-202ENST00000357811 MDH1BQ5I0G3 518 aa21.34■■□□□ 1.01
COL13A1-202ENST00000357811 CDHR3Q6ZTQ4 885 aa21.34■■□□□ 1.01
COL13A1-202ENST00000357811 NUDCD1Q96RS6 583 aa21.34■■□□□ 1.01
COL13A1-202ENST00000357811 FAM49BQ9NUQ9 324 aa21.34■■□□□ 1.01
COL13A1-202ENST00000357811 PIH1D1Q9NWS0 290 aaKnown RBP21.34■■□□□ 1.01
COL13A1-202ENST00000357811 APOC4-APOC2K7ER74 178 aa21.34■■□□□ 1.01
COL13A1-202ENST00000357811 ACKR2O00590 384 aa21.34■■□□□ 1.01
COL13A1-202ENST00000357811 MED7O43513 233 aa21.34■■□□□ 1.01
COL13A1-202ENST00000357811 ZWINTO95229 277 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms