RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 RPL34P49207 117 aaKnown RBP26.76■■□□□ 1.87
SSBP3-202ENST00000357475 RPL10AP62906 217 aaKnown RBP26.76■■□□□ 1.87
SSBP3-202ENST00000357475 ADIGQ0VDE8 80 aa26.76■■□□□ 1.87
SSBP3-202ENST00000357475 RAB41Q5JT25 222 aa26.76■■□□□ 1.87
SSBP3-202ENST00000357475 TOGARAM2Q6ZUX3 1019 aa26.76■■□□□ 1.87
SSBP3-202ENST00000357475 CCDC170Q8IYT3 715 aa26.76■■□□□ 1.87
SSBP3-202ENST00000357475 DEFB123Q8N688 67 aa26.76■■□□□ 1.87
SSBP3-202ENST00000357475 C12orf76Q8N812 135 aaPredicted RBP26.76■■□□□ 1.87
SSBP3-202ENST00000357475 ACRBPQ8NEB7 543 aa26.76■■□□□ 1.87
SSBP3-202ENST00000357475 CCDC112Q8NEF3 446 aa26.76■■□□□ 1.87
SSBP3-202ENST00000357475 CLEC4CQ8WTT0 213 aa26.76■■□□□ 1.87
SSBP3-202ENST00000357475 KCTD13Q8WZ19 329 aa26.76■■□□□ 1.87
SSBP3-202ENST00000357475 SPATA17Q96L03 361 aa26.76■■□□□ 1.87
SSBP3-202ENST00000357475 CDCA3Q99618 268 aaPredicted RBP26.76■■□□□ 1.87
SSBP3-202ENST00000357475 DESI2Q9BSY9 194 aa26.76■■□□□ 1.87
SSBP3-202ENST00000357475 UBXN6Q9BZV1 441 aa26.76■■□□□ 1.87
SSBP3-202ENST00000357475 SLC38A8A6NNN8 435 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 CCL16O15467 120 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 ZMYND10O75800 440 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 C1RP00736 705 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 MMP8P22894 467 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 NSFP46459 744 aaKnown RBP26.75■■□□□ 1.87
SSBP3-202ENST00000357475 ALDH1A3P47895 512 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 GPR153Q6NV75 609 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 CCDC149Q6ZUS6 474 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 MON1BQ7L1V2 547 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 PHF13Q86YI8 300 aaPredicted RBP26.75■■□□□ 1.87
SSBP3-202ENST00000357475 STK32AQ8WU08 396 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 PIWIL1Q96J94 861 aaKnown RBP26.75■■□□□ 1.87
SSBP3-202ENST00000357475 GAS2L1Q99501 681 aaPredicted RBP26.75■■□□□ 1.87
SSBP3-202ENST00000357475 MIS12Q9H081 205 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 ISCUQ9H1K1 167 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 PLEKHA4Q9H4M7 779 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 TFR2Q9UP52 801 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 RTN2O75298 545 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 LCA5LO95447 670 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 GZMAP12544 262 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 TKTL1P51854 596 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 PPM1LQ5SGD2 360 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 TMEM110Q86TL2 294 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 ERICH1Q86X53 443 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 NUP93Q8N1F7 819 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 EFHBQ8N7U6 833 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 PPP2R3CQ969Q6 453 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 HSFY1Q96LI6 401 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 PNPLA8Q9NP80 782 aa26.75■■□□□ 1.87
SSBP3-202ENST00000357475 CHORDC1Q9UHD1 332 aaPredicted RBP26.75■■□□□ 1.87
SSBP3-202ENST00000357475 C2orf16Q68DN1 1984 aa26.74■■□□□ 1.87
SSBP3-202ENST00000357475 EIF3CLB5ME19 914 aaKnown RBP26.74■■□□□ 1.87
SSBP3-202ENST00000357475 ATMINO43313 823 aaPredicted RBP26.74■■□□□ 1.87
SSBP3-202ENST00000357475 CYLC1P35663 651 aaPredicted RBP26.74■■□□□ 1.87
SSBP3-202ENST00000357475 SCUBE3Q8IX30 993 aa26.74■■□□□ 1.87
SSBP3-202ENST00000357475 EIF3CQ99613 913 aaKnown RBP26.74■■□□□ 1.87
SSBP3-202ENST00000357475 ULBP1Q9BZM6 244 aa26.74■■□□□ 1.87
SSBP3-202ENST00000357475 LRRC4Q9HBW1 653 aa26.74■■□□□ 1.87
SSBP3-202ENST00000357475 ARHGAP6O43182 974 aa26.73■■□□□ 1.87
SSBP3-202ENST00000357475 PAPSS1O43252 624 aaPredicted RBP26.73■■□□□ 1.87
SSBP3-202ENST00000357475 LRG1P02750 347 aa26.73■■□□□ 1.87
SSBP3-202ENST00000357475 HMGA1P17096 107 aaKnown RBP26.73■■□□□ 1.87
SSBP3-202ENST00000357475 PGFP49763 221 aa26.73■■□□□ 1.87
SSBP3-202ENST00000357475 DENND5BQ6ZUT9 1274 aa26.73■■□□□ 1.87
SSBP3-202ENST00000357475 FAM183BPQ6ZVS7 135 aa26.73■■□□□ 1.87
SSBP3-202ENST00000357475 MCOLN2Q8IZK6 566 aa26.73■■□□□ 1.87
SSBP3-202ENST00000357475 NOX5Q96PH1 765 aa26.73■■□□□ 1.87
SSBP3-202ENST00000357475 ADAM22Q9P0K1 906 aa26.73■■□□□ 1.87
SSBP3-202ENST00000357475 MAGED2Q9UNF1 606 aaPredicted RBP26.73■■□□□ 1.87
SSBP3-202ENST00000357475 NOTCH4Q99466 2003 aa26.73■■□□□ 1.87
SSBP3-202ENST00000357475 A0A0U1RQJ8 604 aa26.72■■□□□ 1.87
SSBP3-202ENST00000357475 OBSL1O75147 1896 aa26.72■■□□□ 1.87
SSBP3-202ENST00000357475 USP17L7P0C7H9 530 aa26.72■■□□□ 1.87
SSBP3-202ENST00000357475 ABCB4P21439 1286 aa26.72■■□□□ 1.87
SSBP3-202ENST00000357475 GABRB2P47870 512 aa26.72■■□□□ 1.87
SSBP3-202ENST00000357475 EPHB3P54753 998 aa26.72■■□□□ 1.87
SSBP3-202ENST00000357475 DLX2Q07687 328 aaPredicted RBP26.72■■□□□ 1.87
SSBP3-202ENST00000357475 BHLHA9Q7RTU4 235 aa26.72■■□□□ 1.87
SSBP3-202ENST00000357475 DNAJB7Q7Z6W7 309 aaPredicted RBP26.72■■□□□ 1.87
SSBP3-202ENST00000357475 XYLT1Q86Y38 959 aa26.72■■□□□ 1.87
SSBP3-202ENST00000357475 ATRIPQ8WXE1 791 aa26.72■■□□□ 1.87
SSBP3-202ENST00000357475 APOL5Q9BWW9 433 aa26.72■■□□□ 1.87
SSBP3-202ENST00000357475 SYNCQ9H7C4 482 aa26.72■■□□□ 1.87
SSBP3-202ENST00000357475 ZNF334Q9HCZ1 680 aaPredicted RBP26.72■■□□□ 1.87
SSBP3-202ENST00000357475 HCFC1R1Q9NWW0 138 aa26.72■■□□□ 1.87
SSBP3-202ENST00000357475 USP3Q9Y6I4 520 aa26.72■■□□□ 1.87
SSBP3-202ENST00000357475 GJB6O95452 261 aa26.71■■□□□ 1.87
SSBP3-202ENST00000357475 GALCP54803 685 aa26.71■■□□□ 1.87
SSBP3-202ENST00000357475 ADAM15Q13444 863 aa26.71■■□□□ 1.87
SSBP3-202ENST00000357475 HS6ST3Q8IZP7 471 aa26.71■■□□□ 1.87
SSBP3-202ENST00000357475 HDAC7Q8WUI4 952 aa26.71■■□□□ 1.87
SSBP3-202ENST00000357475 CASP10Q92851 521 aa26.71■■□□□ 1.87
SSBP3-202ENST00000357475 ZNF707Q96C28 371 aaPredicted RBP26.71■■□□□ 1.87
SSBP3-202ENST00000357475 C18orf8Q96DM3 657 aa26.71■■□□□ 1.87
SSBP3-202ENST00000357475 THAP2Q9H0W7 228 aa26.71■■□□□ 1.87
SSBP3-202ENST00000357475 MTMR10Q9NXD2 777 aa26.71■■□□□ 1.87
SSBP3-202ENST00000357475 IL37Q9NZH6 218 aa26.71■■□□□ 1.87
SSBP3-202ENST00000357475 CDH22Q9UJ99 828 aa26.71■■□□□ 1.87
SSBP3-202ENST00000357475 PRUNE2Q8WUY3 3088 aa26.71■■□□□ 1.87
SSBP3-202ENST00000357475 CCDC195A0A1B0GUA6 201 aa26.7■■□□□ 1.87
SSBP3-202ENST00000357475 NRG2O14511 850 aaPredicted RBP26.7■■□□□ 1.87
SSBP3-202ENST00000357475 TBX10O75333 385 aa26.7■■□□□ 1.87
SSBP3-202ENST00000357475 RRM1P23921 792 aa26.7■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms