RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 DNAJC19Q96DA6 116 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 EGLN2Q96KS0 407 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 DCUN1D5Q9BTE7 237 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 TDRD1Q9BXT4 1180 aaKnown RBP16.38■□□□□ 0.21
RTN3-205ENST00000356000 ZFYVE28Q9HCC9 887 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 PSMC3IPQ9P2W1 217 aaPredicted RBP16.38■□□□□ 0.21
RTN3-205ENST00000356000 ADAMTS7Q9UKP4 1686 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 CCDC130P13994 396 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 YBX3P16989 372 aaKnown RBP eCLIP16.38■□□□□ 0.212e-9■□□□□ 10.1
RTN3-205ENST00000356000 ACADSBP45954 432 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 SLC25A3Q00325 362 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 MOGQ16653 247 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 C6orf52Q5T4I8 152 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 ESX1Q8N693 406 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 GSDMBQ8TAX9 411 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 RPGRQ92834 1020 aaKnown RBP16.38■□□□□ 0.21
RTN3-205ENST00000356000 GPKOWQ92917 476 aaPredicted RBP eCLIP16.38■□□□□ 0.213e-6■□□□□ 9.4
RTN3-205ENST00000356000 MED30Q96HR3 178 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 FGFBP2Q9BYJ0 223 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 INO80BQ9C086 356 aaPredicted RBP16.38■□□□□ 0.21
RTN3-205ENST00000356000 ALG13Q9NP73 1137 aaKnown RBP16.38■□□□□ 0.21
RTN3-205ENST00000356000 POMPQ9Y244 141 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 RIC1Q4ADV7 1423 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 MEI4A8MW99 385 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 PRR5-ARHGAP8B1AHC4 643 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 DHRS4L1P0CG22 281 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 ARHGAP8P85298 464 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 PDK1Q15118 436 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 TIGD2Q4W5G0 525 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 USP43Q70EL4 1123 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 GRAMD2AQ8IUY3 354 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 FAM20CQ8IXL6 584 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 ZCCHC9Q8N567 271 aaKnown RBP16.37■□□□□ 0.21
RTN3-205ENST00000356000 CALML6Q8TD86 181 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 CHST7Q9NS84 486 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 POU2F3Q9UKI9 436 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 ARFGEF1Q9Y6D6 1849 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.37■□□□□ 0.21
RTN3-205ENST00000356000 ENO2P09104 434 aaPredicted RBP16.37■□□□□ 0.21
RTN3-205ENST00000356000 CDKL1Q00532 357 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 PTK7Q13308 1070 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 RARS2Q5T160 578 aaKnown RBP16.37■□□□□ 0.21
RTN3-205ENST00000356000 PPP4R3CPQ6ZMV5 832 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 BANPQ8N9N5 519 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 ERLEC1Q96DZ1 483 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 SLC7A5P2Q9GIP4 190 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 C12orf65Q9H3J6 166 aaKnown RBP16.37■□□□□ 0.21
RTN3-205ENST00000356000 SACM1LQ9NTJ5 587 aa16.37■□□□□ 0.21
RTN3-205ENST00000356000 CRNNQ9UBG3 495 aaPredicted RBP16.37■□□□□ 0.21
RTN3-205ENST00000356000 MYH14Q7Z406 1995 aaKnown RBP16.36■□□□□ 0.21
RTN3-205ENST00000356000 E5RJQ4 531 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 SORBS2O94875 1100 aaKnown RBP16.36■□□□□ 0.21
RTN3-205ENST00000356000 KRT75O95678 551 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 ATP5BP06576 529 aaKnown RBP16.36■□□□□ 0.21
RTN3-205ENST00000356000 EPHB1P54762 984 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 CLEC16AQ2KHT3 1053 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 ELMOD1Q8N336 334 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 CCDC89Q8N998 374 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 GOLM1Q8NBJ4 401 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 HIPK4Q8NE63 616 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 TRUB1Q8WWH5 349 aaKnown RBP16.36■□□□□ 0.21
RTN3-205ENST00000356000 ALKBH8Q96BT7 664 aaKnown RBP16.36■□□□□ 0.21
RTN3-205ENST00000356000 ZNF512Q96ME7 567 aaPredicted RBP16.36■□□□□ 0.21
RTN3-205ENST00000356000 WWP1Q9H0M0 922 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 C10orf88Q9H8K7 445 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 A0A1B0GUL6 1792 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 CLDN3O15551 220 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 GUCY1B2O75343 617 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 P4HA1P13674 534 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 AOC1P19801 751 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 TNFAIP3P21580 790 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 JAK1P23458 1154 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 BMXP51813 675 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 NDST2P52849 883 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 CTBSQ01459 385 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 MESDQ14696 234 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 ZYXQ15942 572 aaKnown RBP16.36■□□□□ 0.21
RTN3-205ENST00000356000 CCNG2Q16589 344 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 TRIM16LQ309B1 348 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 Q3C1V9 767 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 RALGPS1Q5JS13 557 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 IZUMO3Q5VZ72 239 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 CCSAPQ6IQ19 270 aaPredicted RBP16.36■□□□□ 0.21
RTN3-205ENST00000356000 PPP1R2P3Q6NXS1 205 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 XKR5Q6UX68 686 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 RFPL4BQ6ZWI9 263 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 CLVS1Q8IUQ0 354 aaPredicted RBP16.36■□□□□ 0.21
RTN3-205ENST00000356000 ADCY4Q8NFM4 1077 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 HPS1Q92902 700 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 ZNF641Q96N77 438 aaPredicted RBP16.36■□□□□ 0.21
RTN3-205ENST00000356000 SAYSD1Q9NPB0 183 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 CDH22Q9UJ99 828 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 PCDHA2Q9Y5H9 948 aa16.36■□□□□ 0.21
RTN3-205ENST00000356000 KPNA4O00629 521 aaPredicted RBP16.35■□□□□ 0.21
RTN3-205ENST00000356000 XPO1O14980 1071 aaKnown RBP16.35■□□□□ 0.21
RTN3-205ENST00000356000 H6PDO95479 791 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 RPA1P27694 616 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 IFITM2Q01629 132 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 ARHGEF6Q15052 776 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 TRIM71Q2Q1W2 868 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms