RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 SOBPA7XYQ1 873 aa17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 EGFP01133 1207 aa17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 HDCP19113 662 aa17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 GJA4P35212 333 aa17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 PSMC2P35998 433 aaKnown RBP17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 EDRF1Q3B7T1 1238 aa17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 TMEM196Q5HYL7 178 aa17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 ZNF658Q5TYW1 1059 aaPredicted RBP17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 INTS8Q75QN2 995 aaKnown RBP17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 CRYBG2Q8N1P7 616 aa17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 SLC2A14Q8TDB8 520 aa17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 CCDC47Q96A33 483 aaKnown RBP17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 ZFRQ96KR1 1074 aaKnown RBP17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 ARID3AQ99856 593 aa17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 SMPD4Q9NXE4 827 aa17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 IL37Q9NZH6 218 aa17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 ZMYM5Q9UJ78 669 aa17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 ARHGAP26Q9UNA1 814 aa17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 GPR179Q6PRD1 2367 aa17.77■□□□□ 0.44
PDLIM7-201ENST00000355572 HHLA1C9JL84 531 aa17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 LEFTY2O00292 366 aa17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 AP1G2O75843 785 aa17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 LMNAP02545 664 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 ADORA2BP29275 332 aa17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 SLC5A3P53794 718 aa17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 INCA1Q0VD86 236 aa17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 MESP2Q0VG99 397 aa17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 SRSF5Q13243 272 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 CBWD6Q4V339 395 aa17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 CBWD3Q5JTY5 395 aa17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 CBWD5Q5RIA9 395 aa17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 OSCP1Q8WVF1 389 aa17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 TATDN2Q93075 761 aa17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 MED10Q9BTT4 135 aa17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 ECT2Q9H8V3 914 aa17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 THG1LQ9NWX6 298 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 DUS2Q9NX74 493 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 TRPM5Q9NZQ8 1165 aa17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 CHORDC1Q9UHD1 332 aaPredicted RBP17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 MAN1B1Q9UKM7 699 aa17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 PTPRZ1P23471 2315 aaPredicted RBP17.76■□□□□ 0.43
PDLIM7-201ENST00000355572 KIF20AO95235 890 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 ABL1P00519 1130 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 TCF3P15923 654 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 CD58P19256 250 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 GALK1P51570 392 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 COBLL1Q53SF7 1204 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 MAMSTRQ6ZN01 415 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 SFTPA1Q8IWL2 248 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 NUP93Q8N1F7 819 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 TAF4BQ92750 862 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 MSANTD3Q96H12 275 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 CEP295NLQ96MC4 621 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 CCSER2Q9H7U1 834 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 TMEM8AQ9HCN3 771 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 CSNK1G1Q9HCP0 422 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 OSER1Q9NX31 292 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 ZSCAN32Q9NX65 697 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 GMIPQ9P107 970 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 CPQQ9Y646 472 aa17.75■□□□□ 0.43
PDLIM7-201ENST00000355572 GVINP1Q7Z2Y8 2422 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 RALGAPA1Q6GYQ0 2036 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 FAM92AA1XBS5 289 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 CHURC1-FNTBB4DL54 471 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 TRDMT1O14717 391 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 COCHO43405 550 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 CILPO75339 1184 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 KRT13P13646 458 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 FNTBP49356 437 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 MAP3K7CLP57077 242 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 SLC7A9P82251 487 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 CLEC20AQ6ZU45 233 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 SPEM1Q8N4L4 309 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 FBXO32Q969P5 355 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 JAKMIP2Q96AA8 810 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 SMARCD1Q96GM5 515 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 TNIP3Q96KP6 325 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 TIGD1Q96MW7 591 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 GSDMAQ96QA5 445 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 NIF3L1Q9GZT8 377 aa17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 DMAP1Q9NPF5 467 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-201ENST00000355572 EP300Q09472 2414 aaPredicted RBP17.73■□□□□ 0.43
PDLIM7-201ENST00000355572 ZDHHC11BP0C7U3 371 aa17.73■□□□□ 0.43
PDLIM7-201ENST00000355572 RPL13P26373 211 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-201ENST00000355572 YWHAQP27348 245 aa17.73■□□□□ 0.43
PDLIM7-201ENST00000355572 OPRD1P41143 372 aa17.73■□□□□ 0.43
PDLIM7-201ENST00000355572 CXCL12P48061 93 aa17.73■□□□□ 0.43
PDLIM7-201ENST00000355572 PDGFRLQ15198 375 aa17.73■□□□□ 0.43
PDLIM7-201ENST00000355572 ZNF394Q53GI3 561 aa17.73■□□□□ 0.43
PDLIM7-201ENST00000355572 FILIP1Q7Z7B0 1213 aa17.73■□□□□ 0.43
PDLIM7-201ENST00000355572 UNC93AQ86WB7 457 aa17.73■□□□□ 0.43
PDLIM7-201ENST00000355572 C12orf40Q86WS4 652 aa17.73■□□□□ 0.43
PDLIM7-201ENST00000355572 SMARCE1Q969G3 411 aa17.73■□□□□ 0.43
PDLIM7-201ENST00000355572 DUSP9Q99956 384 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-201ENST00000355572 NMUR1Q9HB89 426 aa17.73■□□□□ 0.43
PDLIM7-201ENST00000355572 PCDHGA2Q9Y5H1 932 aa17.73■□□□□ 0.43
PDLIM7-201ENST00000355572 MYO18AQ92614 2054 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-201ENST00000355572 HRO43593 1189 aa17.72■□□□□ 0.43
PDLIM7-201ENST00000355572 KINO60870 393 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-201ENST00000355572 RNF40O75150 1001 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms