RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 AVILO75366 819 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 KRT7P08729 469 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 PAEPP09466 180 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 SRGAP2BP0DMP2 458 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 SLC26A2P50443 739 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 OVGP1Q12889 678 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 SLC10A6Q3KNW5 377 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 PLPPR4Q7Z2D5 763 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 ZNF677Q86XU0 584 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 PDIK1LQ8N165 341 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 TRIM56Q9BRZ2 755 aaKnown RBP10.87□□□□□ -0.67
SMPD4-201ENST00000351288 MAGEB5Q9BZ81 275 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 CXCL16Q9H2A7 254 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 VTA1Q9NP79 307 aa10.87□□□□□ -0.67
SMPD4-201ENST00000351288 CPSF3Q9UKF6 684 aaKnown RBP10.87□□□□□ -0.67
SMPD4-201ENST00000351288 UPP2O95045 317 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 MMP8P22894 467 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 EIF4BP23588 611 aaKnown RBP10.86□□□□□ -0.67
SMPD4-201ENST00000351288 MIPP30301 263 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 ARL4AP40617 200 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 AP1B1Q10567 949 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 MSS51Q4VC12 460 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 SPOUT1Q5T280 376 aaKnown RBP10.86□□□□□ -0.67
SMPD4-201ENST00000351288 ZNF449Q6P9G9 518 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 TRMT10CQ7L0Y3 403 aaKnown RBP10.86□□□□□ -0.67
SMPD4-201ENST00000351288 PARP9Q8IXQ6 854 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 HACE1Q8IYU2 909 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 PPM1NQ8N819 430 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 SLC2A14Q8TDB8 520 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 MORC4Q8TE76 937 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 FAM172AQ8WUF8 416 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 EDEM1Q92611 657 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 TMEM237Q96Q45 408 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 MRPL45Q9BRJ2 306 aaKnown RBP10.86□□□□□ -0.67
SMPD4-201ENST00000351288 KNL1Q8NG31 2342 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 LIASO43766 372 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 GAS2O43903 313 aaKnown RBP10.86□□□□□ -0.67
SMPD4-201ENST00000351288 SNX3O60493 162 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 SLC4A1P02730 911 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 SESN2P58004 480 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-201ENST00000351288 RTP1P59025 263 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 MBTD1Q05BQ5 628 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 PIGHQ14442 188 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-201ENST00000351288 SPOCD1Q6ZMY3 1216 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 RCOR2Q8IZ40 523 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 FAM193BQ96PV7 902 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-201ENST00000351288 FERMT1Q9BQL6 677 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 ELOVL4Q9GZR5 314 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 NACA2Q9H009 215 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 USP18Q9UMW8 372 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 ADAMTS5Q9UNA0 930 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 ATP8B3O60423 1300 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 C17orf102A2RUQ5 167 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 TMEM191CA6NGB0 347 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 C22orf31O95567 290 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 MAN1A1P33908 653 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 RPA3P35244 121 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-201ENST00000351288 ITKQ08881 620 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 CCNG2Q16589 344 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 PPP1R26Q5T8A7 1209 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-201ENST00000351288 PLEKHA7Q6IQ23 1121 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 FITM2Q8N6M3 262 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 DNAAF3Q8N9W5 541 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 C12orf50Q8NA57 414 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-201ENST00000351288 USP33Q8TEY7 942 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 ZC3H15Q8WU90 426 aaKnown RBP10.86□□□□□ -0.67
SMPD4-201ENST00000351288 PDZD7Q9H5P4 517 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 ECT2Q9H8V3 914 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 DCTN4Q9UJW0 460 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 TNFSF13BQ9Y275 285 aa10.86□□□□□ -0.67
SMPD4-201ENST00000351288 GON4LQ3T8J9 2241 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 C5orf60A6NFR6 353 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 TRPA1O75762 1119 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 CNMDO75829 334 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 RASSF9O75901 435 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 MMP3P08254 477 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 HOXC6P09630 235 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 ATXN1P54253 815 aaKnown RBP10.85□□□□□ -0.67
SMPD4-201ENST00000351288 MAP3K7CLP57077 242 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 WDR4P57081 412 aaKnown RBP10.85□□□□□ -0.67
SMPD4-201ENST00000351288 LMNB2Q03252 620 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 TAF12Q16514 161 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 FSCN1Q16658 493 aaKnown RBP10.85□□□□□ -0.67
SMPD4-201ENST00000351288 ZC3H12AQ5D1E8 599 aaKnown RBP10.85□□□□□ -0.67
SMPD4-201ENST00000351288 SPRYD7Q5W111 196 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 CENPUQ71F23 418 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 SPATS2Q86XZ4 545 aaKnown RBP10.85□□□□□ -0.67
SMPD4-201ENST00000351288 ABI1Q8IZP0 508 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 NSRP1Q9H0G5 558 aaKnown RBP10.85□□□□□ -0.67
SMPD4-201ENST00000351288 ZFYVE28Q9HCC9 887 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 AVENQ9NQS1 362 aaPredicted RBP10.85□□□□□ -0.67
SMPD4-201ENST00000351288 SNAI1O95863 264 aaPredicted RBP10.85□□□□□ -0.67
SMPD4-201ENST00000351288 GPD1P21695 349 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 MLH1P40692 756 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 FBXO47Q5MNV8 452 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 ARHGEF18Q6ZSZ5 1173 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 CTU1Q7Z7A3 348 aaKnown RBP10.85□□□□□ -0.67
SMPD4-201ENST00000351288 PIGWQ7Z7B1 504 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 UNC45BQ8IWX7 931 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 PITPNM3Q9BZ71 974 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms