RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 ACP6Q9NPH0 428 aa10.77□□□□□ -0.69
CHRNA1-202ENST00000348749 ZNHIT2Q9UHR6 403 aa10.77□□□□□ -0.69
CHRNA1-202ENST00000348749 HERC5Q9UII4 1024 aaKnown RBP10.77□□□□□ -0.69
CHRNA1-202ENST00000348749 PADI4Q9UM07 663 aa10.77□□□□□ -0.69
CHRNA1-202ENST00000348749 NR2E3Q9Y5X4 410 aa10.77□□□□□ -0.69
CHRNA1-202ENST00000348749 KANSL1LA0AUZ9 987 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 DENND3A2RUS2 1198 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 E5RJQ4 531 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 G3V3G9 751 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 TXNDC9O14530 226 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 PROSCO94903 275 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 TNFAIP8O95379 198 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 SERPINA6P08185 405 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 UNGP13051 313 aaPredicted RBP10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 RARRES1P49788 294 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 ARSEP51690 589 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 OXCT1P55809 520 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 RAB15P59190 212 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 SNAP25P60880 206 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 NOP14P78316 857 aaKnown RBP10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 NCOA4Q13772 614 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 LPIN1Q14693 890 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 EFTUD2Q15029 972 aaKnown RBP eCLIP10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 HP1BP3Q5SSJ5 553 aaPredicted RBP10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 DCAF8Q5TAQ9 597 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 STRIP1Q5VSL9 837 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 CIAPIN1Q6FI81 312 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 PGM2L1Q6PCE3 622 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 DHRS4L2Q6PKH6 230 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 SH2D5Q6ZV89 423 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 ANO5Q75V66 913 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 RHOT1Q8IXI2 618 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 GLIS1Q8NBF1 620 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 PLEKHO2Q8TD55 490 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 MFSD14AQ96MC6 490 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 FBXL18Q96ME1 805 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 SIKE1Q9BRV8 207 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 ADAM33Q9BZ11 813 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 FHDC1Q9C0D6 1143 aaPredicted RBP10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 PCIF1Q9H4Z3 704 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 RAB20Q9NX57 234 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 DRG1Q9Y295 367 aaKnown RBP10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 RBM47A0AV96 593 aaKnown RBP10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 CCDC160A6NGH7 325 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 GOLGA8RI6L899 631 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 POLRMTO00411 1230 aaKnown RBP10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 MAGEB3O15480 346 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 FAM155BO75949 473 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 MT-ND3P03897 115 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 NPR1P16066 1061 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 GLRA2P23416 452 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 SLC5A2P31639 672 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 MLH1P40692 756 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 QARSP47897 775 aaKnown RBP10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 ERFP50548 548 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 GHRHRQ02643 423 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 GSTM4Q03013 218 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 GPS1Q13098 491 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 TFDP1Q14186 410 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 KRT81Q14533 505 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 TLR1Q15399 786 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 TRIP10Q15642 601 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 SNRNP35Q16560 246 aaKnown RBP10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 HIF1AQ16665 826 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 LIN9Q5TKA1 542 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 TSHZ1Q6ZSZ6 1077 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 TRIM67Q6ZTA4 783 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 C3orf62Q6ZUJ4 267 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 PCGF5Q86SE9 256 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 ZNF410Q86VK4 478 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 MAP4K3Q8IVH8 894 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 ANKRD31Q8N7Z5 1873 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 CEP70Q8NHQ1 597 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 SLC26A7Q8TE54 656 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 TTC17Q96AE7 1141 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 NLRP4Q96MN2 994 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 FAM111AQ96PZ2 611 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 FAM118BQ9BPY3 351 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 MAF1Q9H063 256 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 MRPL47Q9HD33 250 aaKnown RBP10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 INIPQ9NRY2 104 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 ARHGEF38Q9NXL2 777 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 RAB26Q9ULW5 256 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 TMX2Q9Y320 296 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 PCDHB2Q9Y5E7 798 aa10.76□□□□□ -0.69
CHRNA1-202ENST00000348749 ZNF646O15015 1829 aaPredicted RBP10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 IQANK1A0A1B0GTG1 560 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 SH3PXD2BA1X283 911 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 PRR5-ARHGAP8B1AHC4 643 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 I3L4J1 428 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 ZSCAN5DPP0CG00 497 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 ARP10275 920 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 ZNF24P17028 368 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 PCSK6P29122 969 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 ARHGAP8P85298 464 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 PPIDQ08752 370 aaKnown RBP10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 CCDC92Q53HC0 331 aaPredicted RBP10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 MDH1BQ5I0G3 518 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 LRRC8BQ6P9F7 803 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms