RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 FLT3P36888 993 aa19.59■□□□□ 0.73
PTN-201ENST00000348225 SLC11A1P49279 550 aa19.59■□□□□ 0.73
PTN-201ENST00000348225 ADIGQ0VDE8 80 aa19.59■□□□□ 0.73
PTN-201ENST00000348225 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.59■□□□□ 0.73
PTN-201ENST00000348225 C4orf50Q6ZRC1 276 aa19.59■□□□□ 0.73
PTN-201ENST00000348225 RCOR2Q8IZ40 523 aa19.59■□□□□ 0.73
PTN-201ENST00000348225 CCDC151A5D8V7 595 aa19.58■□□□□ 0.73
PTN-201ENST00000348225 GRAP2O75791 330 aa19.58■□□□□ 0.73
PTN-201ENST00000348225 BEST1O76090 585 aa19.58■□□□□ 0.73
PTN-201ENST00000348225 SLC25A11Q02978 314 aaKnown RBP19.58■□□□□ 0.73
PTN-201ENST00000348225 ADAT2Q7Z6V5 191 aaKnown RBP19.58■□□□□ 0.73
PTN-201ENST00000348225 DCP1BQ8IZD4 617 aaKnown RBP19.58■□□□□ 0.73
PTN-201ENST00000348225 TMEM199Q8N511 208 aa19.58■□□□□ 0.73
PTN-201ENST00000348225 CCDC26Q8TAB7 109 aa19.58■□□□□ 0.73
PTN-201ENST00000348225 SMOQ99835 787 aa19.58■□□□□ 0.73
PTN-201ENST00000348225 CSNK1G1Q9HCP0 422 aa19.58■□□□□ 0.73
PTN-201ENST00000348225 STIM2Q9P246 746 aa19.58■□□□□ 0.73
PTN-201ENST00000348225 FSCN2O14926 492 aa19.58■□□□□ 0.72
PTN-201ENST00000348225 SART1O43290 800 aaKnown RBP19.58■□□□□ 0.72
PTN-201ENST00000348225 HSF2BPO75031 334 aa19.58■□□□□ 0.72
PTN-201ENST00000348225 ERLIN1O75477 346 aa19.58■□□□□ 0.72
PTN-201ENST00000348225 UPP2O95045 317 aa19.58■□□□□ 0.72
PTN-201ENST00000348225 AMHP03971 560 aa19.58■□□□□ 0.72
PTN-201ENST00000348225 TCF4P15884 667 aa19.58■□□□□ 0.72
PTN-201ENST00000348225 COPS2P61201 443 aa19.58■□□□□ 0.72
PTN-201ENST00000348225 MAATS1Q7Z4T9 603 aa19.58■□□□□ 0.72
PTN-201ENST00000348225 SPATA2LQ8IUW3 424 aaPredicted RBP19.58■□□□□ 0.72
PTN-201ENST00000348225 CLEC4CQ8WTT0 213 aa19.58■□□□□ 0.72
PTN-201ENST00000348225 KHSRPQ92945 711 aaKnown RBP eCLIP19.58■□□□□ 0.72
PTN-201ENST00000348225 DDX47Q9H0S4 455 aaKnown RBP19.58■□□□□ 0.72
PTN-201ENST00000348225 DMAP1Q9NPF5 467 aaPredicted RBP19.58■□□□□ 0.72
PTN-201ENST00000348225 MARCH5Q9NX47 278 aa19.58■□□□□ 0.72
PTN-201ENST00000348225 TRIM43BA6NCK2 446 aa19.57■□□□□ 0.72
PTN-201ENST00000348225 PHF2O75151 1096 aa19.57■□□□□ 0.72
PTN-201ENST00000348225 GALTP07902 379 aa19.57■□□□□ 0.72
PTN-201ENST00000348225 GLI1P08151 1106 aa19.57■□□□□ 0.72
PTN-201ENST00000348225 PTPN9P43378 593 aa19.57■□□□□ 0.72
PTN-201ENST00000348225 TKTL1P51854 596 aa19.57■□□□□ 0.72
PTN-201ENST00000348225 BCAR1P56945 870 aa19.57■□□□□ 0.72
PTN-201ENST00000348225 VSNL1P62760 191 aa19.57■□□□□ 0.72
PTN-201ENST00000348225 MRPS5P82675 430 aaKnown RBP19.57■□□□□ 0.72
PTN-201ENST00000348225 TAF5Q15542 800 aa19.57■□□□□ 0.72
PTN-201ENST00000348225 CCDC14Q49A88 953 aa19.57■□□□□ 0.72
PTN-201ENST00000348225 VARS2Q5ST30 1063 aaKnown RBP19.57■□□□□ 0.72
PTN-201ENST00000348225 FAM171A1Q5VUB5 890 aa19.57■□□□□ 0.72
PTN-201ENST00000348225 MFSD5Q6N075 450 aa19.57■□□□□ 0.72
PTN-201ENST00000348225 TRNP1Q6NT89 227 aa19.57■□□□□ 0.72
PTN-201ENST00000348225 TRIM43Q96BQ3 446 aaPredicted RBP19.57■□□□□ 0.72
PTN-201ENST00000348225 RUNDC3BQ96NL0 473 aa19.57■□□□□ 0.72
PTN-201ENST00000348225 ZCWPW1Q9H0M4 648 aa19.57■□□□□ 0.72
PTN-201ENST00000348225 PNPLA8Q9NP80 782 aa19.57■□□□□ 0.72
PTN-201ENST00000348225 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.57■□□□□ 0.72
PTN-201ENST00000348225 DGKIO75912 1065 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 BDNFP23560 247 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 MIPP30301 263 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 CHRNA3P32297 505 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 ADCY1Q08828 1119 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 NFE2Q16621 373 aaPredicted RBP19.56■□□□□ 0.72
PTN-201ENST00000348225 RAB41Q5JT25 222 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 ZNF280DQ6N043 979 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 FUT10Q6P4F1 479 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 LRRTM3Q86VH5 581 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 ARFGAP1Q8N6T3 406 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 ZMIZ2Q8NF64 920 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 VWCEQ96DN2 955 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 CFAP57Q96MR6 1250 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 SLITRK1Q96PX8 696 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 TMEM209Q96SK2 561 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 OSBPL8Q9BZF1 889 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 ZWILCHQ9H900 591 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 CNGB3Q9NQW8 809 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 TMLHEQ9NVH6 421 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.56■□□□□ 0.72
PTN-201ENST00000348225 USP18Q9UMW8 372 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 KIAA0100Q14667 2235 aaKnown RBP19.56■□□□□ 0.72
PTN-201ENST00000348225 PTPRDP23468 1912 aa19.56■□□□□ 0.72
PTN-201ENST00000348225 NLRC5Q86WI3 1866 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 OR6C75A6NL08 312 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 RAD51CO43502 376 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 PRPSAP2O60256 369 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 DAB1O75553 588 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 HEXIM1O94992 359 aaKnown RBP19.55■□□□□ 0.72
PTN-201ENST00000348225 RALAP11233 206 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 CSF2RAP15509 400 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 FGFR3P22607 806 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 PTPN7P35236 360 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 CLCN6P51797 869 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 CDO1Q16878 200 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 C15orf59Q2T9L4 293 aaPredicted RBP19.55■□□□□ 0.72
PTN-201ENST00000348225 TMCO3Q6UWJ1 677 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 CEP57Q86XR8 500 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 PRELID2Q8N945 189 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 FAM172AQ8WUF8 416 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 TOP1MTQ969P6 601 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 RNF25Q96BH1 459 aaPredicted RBP19.55■□□□□ 0.72
PTN-201ENST00000348225 FAM149B1Q96BN6 582 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 KCNK16Q96T55 309 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 NGRNQ9NPE2 291 aaKnown RBP19.55■□□□□ 0.72
PTN-201ENST00000348225 KLHL11Q9NVR0 708 aa19.55■□□□□ 0.72
PTN-201ENST00000348225 VWA8A3KMH1 1905 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms