RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 DDX23Q9BUQ8 820 aaKnown RBP16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 FOXQ1Q9C009 403 aa16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 PNPLA8Q9NP80 782 aa16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 TLR8Q9NR97 1041 aaKnown RBP16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 GKN1Q9NS71 199 aa16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 LMBRD1Q9NUN5 540 aa16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 HESX1Q9UBX0 185 aa16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 NDRG2Q9UN36 371 aaKnown RBP16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 ZNF318Q5VUA4 2279 aa16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 NUP210Q8TEM1 1887 aaPredicted RBP16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 ZNF840PA6NDX5 716 aa16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 PI15O43692 258 aa16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 TADA3O75528 432 aa16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 DCNP07585 359 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 MTIF2P46199 727 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 IFNAR2P48551 515 aa16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 CACNA2D1P54289 1103 aa16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 USP46P62068 366 aa16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 CT47A1Q5JQC4 288 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 PAQR9Q6ZVX9 377 aa16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 PPM1KQ8N3J5 372 aa16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 ATOH1Q92858 354 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 RSPRY1Q96DX4 576 aa16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 FAM81BQ96LP2 452 aa16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 CYP2S1Q96SQ9 504 aa16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 CSNK1G1Q9HCP0 422 aa16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 KIAA1257Q9ULG3 409 aa16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 ARHGAP26Q9UNA1 814 aa16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 ZNF638Q14966 1978 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-201ENST00000346501 PTPRDP23468 1912 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 C2orf78A6NCI8 922 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 SLC9A3R1O14745 358 aaPredicted RBP16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 MBD3O95983 291 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 MBL2P11226 248 aaPredicted RBP16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 CD19P15391 556 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 CD72P21854 359 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 ERCC5P28715 1186 aaPredicted RBP16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 LRRC32Q14392 662 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 MTF1Q14872 753 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 SGO2Q562F6 1265 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 HECTD3Q5T447 861 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 CPA6Q8N4T0 437 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 PRSS33Q8NF86 280 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 SH3RF2Q8TEC5 729 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 WHAMMQ8TF30 809 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 ATP2A3Q93084 1043 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 JAKMIP2Q96AA8 810 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 ZFYVE19Q96K21 471 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 CNOT6LQ96LI5 555 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 TWNKQ96RR1 684 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 SMOQ99835 787 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 DUSP16Q9BY84 665 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 DUS2Q9NX74 493 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 NCANO14594 1321 aa16.67■□□□□ 0.26
TSPAN4-201ENST00000346501 LAMTOR5O43504 91 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 LRRN2O75325 713 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 PRKCSHP14314 528 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 ACO1P21399 889 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 GOLGA8FQ08AF8 430 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 GOLGA8DPQ0D2H9 430 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 RUNX3Q13761 415 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 PPP2R5DQ14738 602 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 PPP1R26Q5T8A7 1209 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 CLEC20AQ6ZU45 233 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 TADA2BQ86TJ2 420 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 EHBP1Q8NDI1 1231 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 SCAMP5Q8TAC9 235 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 ARID3AQ99856 593 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 IER2Q9BTL4 223 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 THAP9Q9H5L6 903 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 TMEM30AQ9NV96 361 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 SPATA6Q9NWH7 488 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 GTSE1Q9NYZ3 720 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 GCNT4Q9P109 453 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 CHORDC1Q9UHD1 332 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 CCL26Q9Y258 94 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 PCDHB4Q9Y5E5 795 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 MYH10P35580 1976 aa16.66■□□□□ 0.26
TSPAN4-201ENST00000346501 KMT2EQ8IZD2 1858 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 SPECC1L-ADORA2AF8WAN1 911 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 H0Y858 1186 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 TNFRSF10BO14763 440 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 PAEPP09466 180 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 VDRP11473 427 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 TCF3P15923 654 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 TARSP26639 723 aaKnown RBP16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 RPS9P46781 194 aaKnown RBP16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 PSEN1P49768 467 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 TUBP50607 506 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 RAD23BP54727 409 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 SLC7A9P82251 487 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 NHLH1Q02575 133 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 ANGPT1Q15389 498 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 STILQ15468 1287 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 ARHGAP17Q68EM7 881 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 TMEM270Q6UE05 265 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 SASS6Q6UVJ0 657 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 KIAA1958Q8N8K9 716 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 SLC4A11Q8NBS3 891 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 TTC8Q8TAM2 541 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms