RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 LRRC26Q2I0M4 334 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 TRNP1Q6NT89 227 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 MAATS1Q7Z4T9 603 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 MTERF4Q7Z6M4 381 aaKnown RBP22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 ARFGAP1Q8N6T3 406 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 PKMYT1Q99640 499 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 ARFGAP3Q9NP61 516 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 TBKBP1A7MCY6 615 aa22.52■■□□□ 1.2
TSPAN3-202ENST00000346495 SYN3O14994 580 aa22.52■■□□□ 1.2
TSPAN3-202ENST00000346495 HEXIM1O94992 359 aaKnown RBP22.52■■□□□ 1.2
TSPAN3-202ENST00000346495 SDC4P31431 198 aa22.52■■□□□ 1.2
TSPAN3-202ENST00000346495 CHRNA3P32297 505 aa22.52■■□□□ 1.2
TSPAN3-202ENST00000346495 MRPS25P82663 173 aaKnown RBP22.52■■□□□ 1.2
TSPAN3-202ENST00000346495 ADIGQ0VDE8 80 aa22.52■■□□□ 1.2
TSPAN3-202ENST00000346495 TAF5Q15542 800 aa22.52■■□□□ 1.2
TSPAN3-202ENST00000346495 NECAB2Q7Z6G3 386 aa22.52■■□□□ 1.2
TSPAN3-202ENST00000346495 PRELID2Q8N945 189 aa22.52■■□□□ 1.2
TSPAN3-202ENST00000346495 OR10T2Q8NGX3 314 aa22.52■■□□□ 1.2
TSPAN3-202ENST00000346495 SMOQ99835 787 aa22.52■■□□□ 1.2
TSPAN3-202ENST00000346495 TMEM106CQ9BVX2 250 aa22.52■■□□□ 1.2
TSPAN3-202ENST00000346495 ADAM28Q9UKQ2 775 aa22.52■■□□□ 1.2
TSPAN3-202ENST00000346495 FAN1Q9Y2M0 1017 aa22.52■■□□□ 1.2
TSPAN3-202ENST00000346495 OAZ2O95190 189 aa22.51■■□□□ 1.19
TSPAN3-202ENST00000346495 RARAP10276 462 aa22.51■■□□□ 1.19
TSPAN3-202ENST00000346495 CYP1B1Q16678 543 aa22.51■■□□□ 1.19
TSPAN3-202ENST00000346495 CCDC14Q49A88 953 aa22.51■■□□□ 1.19
TSPAN3-202ENST00000346495 ATP13A4Q4VNC1 1196 aa22.51■■□□□ 1.19
TSPAN3-202ENST00000346495 IFT20Q8IY31 132 aa22.51■■□□□ 1.19
TSPAN3-202ENST00000346495 SIX6OS1Q8N1H7 587 aa22.51■■□□□ 1.19
TSPAN3-202ENST00000346495 CLEC4CQ8WTT0 213 aa22.51■■□□□ 1.19
TSPAN3-202ENST00000346495 RNF25Q96BH1 459 aaPredicted RBP22.51■■□□□ 1.19
TSPAN3-202ENST00000346495 RUNDC3BQ96NL0 473 aa22.51■■□□□ 1.19
TSPAN3-202ENST00000346495 SLITRK1Q96PX8 696 aa22.51■■□□□ 1.19
TSPAN3-202ENST00000346495 OSBPL8Q9BZF1 889 aa22.51■■□□□ 1.19
TSPAN3-202ENST00000346495 CSNK1G1Q9HCP0 422 aa22.51■■□□□ 1.19
TSPAN3-202ENST00000346495 TCRBV7S2A1N4TA0A589 114 aa22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 ZMYND10O75800 440 aa22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 FBXO21O94952 628 aa22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 RALAP11233 206 aa22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 TNFRSF8P28908 595 aa22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 MIPP30301 263 aa22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 SIX1Q15475 284 aaPredicted RBP22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 MAP9Q49MG5 647 aa22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 TXNRD3NBQ6F5E7 133 aa22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 CCNI2Q6ZMN8 369 aaPredicted RBP22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 ZDHHC14Q8IZN3 488 aa22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 LRRC43Q8N309 656 aa22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 C12orf50Q8NA57 414 aaPredicted RBP22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 MAGOHBQ96A72 148 aaKnown RBP22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 ZWILCHQ9H900 591 aa22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 KLHL11Q9NVR0 708 aa22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 AMACRQ9UHK6 382 aa22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 USP18Q9UMW8 372 aa22.5■■□□□ 1.19
TSPAN3-202ENST00000346495 HSF2BPO75031 334 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 TRUB2O95900 331 aaKnown RBP22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 GLI1P08151 1106 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 HSPA1AP0DMV8 641 aaKnown RBP22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 HSPA1BP0DMV9 641 aaKnown RBP22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 PTPN7P35236 360 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 PTPN9P43378 593 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 SLC11A1P49279 550 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 MRPS5P82675 430 aaKnown RBP22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 ADCY1Q08828 1119 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 DHX34Q14147 1143 aaKnown RBP22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 C15orf59Q2T9L4 293 aaPredicted RBP22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 SPOCD1Q6ZMY3 1216 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.49■■□□□ 1.194e-8■■■□□ 17.1
TSPAN3-202ENST00000346495 C4orf50Q6ZRC1 276 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 ZMIZ2Q8NF64 920 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 CFAP57Q96MR6 1250 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 TMEM209Q96SK2 561 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 GDF3Q9NR23 364 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 NLRC5Q86WI3 1866 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 PTPRDP23468 1912 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 LTBP2Q14767 1821 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 PI4K2BG5E9Z4 385 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 TIMP1P01033 207 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 IL1R2P27930 398 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 TKTL1P51854 596 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 GUCY2DQ02846 1103 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 LRRTM3Q86VH5 581 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 DCP1BQ8IZD4 617 aaKnown RBP22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 EPB41L5Q9HCM4 733 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 TMLHEQ9NVH6 421 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 PCSK1NQ9UHG2 260 aa22.49■■□□□ 1.19
TSPAN3-202ENST00000346495 ABHD14A-ACY1A0A1B0GW23 586 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 LRRD1A4D1F6 860 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 FAM187AA6NFU0 413 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 BDNFP23560 247 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 FNTAP49354 379 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 DR1Q01658 176 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 ELAVL2Q12926 359 aaKnown RBP22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 KLF1Q13351 362 aaPredicted RBP22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 CDO1Q16878 200 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 RAB41Q5JT25 222 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 MFSD7Q6UXD7 560 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 SPATA2LQ8IUW3 424 aaPredicted RBP22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 FAM172AQ8WUF8 416 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms