RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 CENPCQ03188 943 aa16.08■□□□□ 0.16
SRPK1-201ENST00000346162 ACAP1Q15027 740 aa16.08■□□□□ 0.16
SRPK1-201ENST00000346162 SYCP2LQ5T4T6 812 aa16.08■□□□□ 0.16
SRPK1-201ENST00000346162 PID1Q7Z2X4 250 aa16.08■□□□□ 0.16
SRPK1-201ENST00000346162 CCNJLQ8IV13 435 aa16.08■□□□□ 0.16
SRPK1-201ENST00000346162 SLC20A1Q8WUM9 679 aa16.08■□□□□ 0.16
SRPK1-201ENST00000346162 DGCR14Q96DF8 476 aaKnown RBP16.08■□□□□ 0.16
SRPK1-201ENST00000346162 RABGEF1Q9UJ41 708 aa16.08■□□□□ 0.16
SRPK1-201ENST00000346162 PIN4Q9Y237 131 aaKnown RBP16.08■□□□□ 0.16
SRPK1-201ENST00000346162 HBP1O60381 514 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 RBP3P10745 1247 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 SAMD3Q8N6K7 520 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 GLIS3Q8NEA6 775 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 ATP6V1E2Q96A05 226 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 KCNQ5Q9NR82 932 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 TAF4O00268 1085 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 TCF7P36402 384 aaPredicted RBP16.07■□□□□ 0.16
SRPK1-201ENST00000346162 SV2AQ7L0J3 742 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 FAM83AQ86UY5 434 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 RYBPQ8N488 228 aaPredicted RBP16.07■□□□□ 0.16
SRPK1-201ENST00000346162 C1orf131Q8NDD1 294 aaKnown RBP16.07■□□□□ 0.16
SRPK1-201ENST00000346162 DHX38Q92620 1227 aaKnown RBP16.07■□□□□ 0.16
SRPK1-201ENST00000346162 PBXIP1Q96AQ6 731 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 FHDC1Q9C0D6 1143 aaPredicted RBP16.07■□□□□ 0.16
SRPK1-201ENST00000346162 PLGRKTQ9HBL7 147 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 AGO4Q9HCK5 861 aaKnown RBP16.07■□□□□ 0.16
SRPK1-201ENST00000346162 SIK3Q9Y2K2 1263 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 GRIN2DO15399 1336 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 GRAP2O75791 330 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 IL18RAPO95256 599 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 SMAD1Q15797 465 aaKnown RBP16.07■□□□□ 0.16
SRPK1-201ENST00000346162 CNGA2Q16280 664 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 OR6J1Q8NGC5 347 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 TMC2Q8TDI7 906 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 TMA16Q96EY4 203 aaKnown RBP16.07■□□□□ 0.16
SRPK1-201ENST00000346162 FGRP09769 529 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 PMLP29590 882 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 DEFA1P59665 94 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 DEFA3P59666 94 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 SMTNL2Q2TAL5 461 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 SPATA20Q8TB22 786 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 SKA2Q8WVK7 121 aaPredicted RBP16.07■□□□□ 0.16
SRPK1-201ENST00000346162 HAS1Q92839 578 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 GCNAQ96QF7 691 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 NT5C1AQ9BXI3 368 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 EBF2Q9HAK2 575 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 ERAP1Q9NZ08 941 aa16.07■□□□□ 0.16
SRPK1-201ENST00000346162 GH1P01241 217 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 CCDC166P0CW27 439 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 ATP8B4Q8TF62 1192 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 ARHGEF26Q96DR7 871 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 SAR1AQ9NR31 198 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 SELENONQ9NZV5 590 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 WFS1O76024 890 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 MFN2O95140 757 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 TYK2P29597 1187 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 MTM1Q13496 603 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 SPDYCQ5MJ68 293 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 SPATA18Q8TC71 538 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 FSD1LQ9BXM9 530 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 KIF1AQ12756 1690 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 OGTO15294 1046 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 ZC3H11AO75152 810 aaKnown RBP eCLIP16.06■□□□□ 0.167e-9■□□□□ 10.6
SRPK1-201ENST00000346162 DDHD2O94830 711 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 CHN2P52757 468 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 PLOD1Q02809 727 aaPredicted RBP16.06■□□□□ 0.16
SRPK1-201ENST00000346162 EFTUD2Q15029 972 aaKnown RBP eCLIP16.06■□□□□ 0.162e-10■■■□□ 18.5
SRPK1-201ENST00000346162 GIPC2Q8TF65 315 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 CAPSLQ8WWF8 208 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 ATG4AQ8WYN0 398 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 NOL6Q9H6R4 1146 aaKnown RBP16.06■□□□□ 0.16
SRPK1-201ENST00000346162 PXMP2Q9NR77 195 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 C16orf96A6NNT2 1141 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 DYNC1LI2O43237 492 aaPredicted RBP16.06■□□□□ 0.16
SRPK1-201ENST00000346162 RIPK2O43353 540 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 SUPT20HL2P0C7V6 817 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 PAMP19021 973 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 RRM1P23921 792 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 SLC12A3P55017 1021 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 SESN2P58004 480 aaPredicted RBP16.06■□□□□ 0.16
SRPK1-201ENST00000346162 MTFR1Q15390 333 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 FAM13CQ8NE31 585 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 JADE3Q92613 823 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 E2F7Q96AV8 911 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 SIK2Q9H0K1 926 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 DOLKQ9UPQ8 538 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 NAALADL1Q9UQQ1 740 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 HBS1LQ9Y450 684 aaKnown RBP16.06■□□□□ 0.16
SRPK1-201ENST00000346162 NFAT5O94916 1531 aa16.06■□□□□ 0.16
SRPK1-201ENST00000346162 NAMPTP43490 491 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 MAPRE2Q15555 327 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 PTF1AQ7RTS3 328 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 PLD3Q8IV08 490 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 USP33Q8TEY7 942 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 TMEM120AQ9BXJ8 343 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 C20orf96Q9NUD7 363 aaPredicted RBP16.05■□□□□ 0.16
SRPK1-201ENST00000346162 SYBUQ9NX95 663 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 CCDC189A1A4V9 331 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 TRIM43BA6NCK2 446 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 CES2O00748 559 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms