RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 PNPLA8Q9NP80 782 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 DNMT3BQ9UBC3 853 aaKnown RBP12.52□□□□□ -0.41
SNCA-202ENST00000345009 MYO6Q9UM54 1294 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 MAGED2Q9UNF1 606 aaPredicted RBP12.52□□□□□ -0.41
SNCA-202ENST00000345009 CEP83Q9Y592 693 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 CLUHO75153 1309 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 PLXNA3P51805 1871 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 SLC38A8A6NNN8 435 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 F8VZ95 297 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 RNF225M0QZC1 329 aaPredicted RBP12.51□□□□□ -0.41
SNCA-202ENST00000345009 O00370 1275 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 CYP26A1O43174 497 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 TPM1P09493 284 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 SETSIPP0DME0 302 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 KCNQ1P51787 676 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 EPHA5P54756 1037 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 MAP3K7CLP57077 242 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 BST2Q10589 180 aaKnown RBP12.51□□□□□ -0.41
SNCA-202ENST00000345009 MEA1Q16626 185 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 CCDC142Q17RM4 750 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 GOLGA7BQ2TAP0 167 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 PACS2Q86VP3 889 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 GPR152Q8TDT2 470 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 ZNF606Q8WXB4 792 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 TRMT2BQ96GJ1 504 aaKnown RBP12.51□□□□□ -0.41
SNCA-202ENST00000345009 MYRFLQ96LU7 910 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 KCNK16Q96T55 309 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 TRIM5Q9C035 493 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 NUCKS1Q9H1E3 243 aaKnown RBP12.51□□□□□ -0.41
SNCA-202ENST00000345009 GANQ9H2C0 597 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 POMKQ9H5K3 350 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 NLRC4Q9NPP4 1024 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 GDE1Q9NZC3 331 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 TSPAN16Q9UKR8 245 aa12.51□□□□□ -0.41
SNCA-202ENST00000345009 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNCA-202ENST00000345009 SOBPA7XYQ1 873 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 BHMG1C9JSJ3 638 aaPredicted RBP12.5□□□□□ -0.41
SNCA-202ENST00000345009 M0QYV0 167 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 NOL4O94818 638 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 BMP1P13497 986 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 BRD2P25440 801 aaKnown RBP12.5□□□□□ -0.41
SNCA-202ENST00000345009 YWHAQP27348 245 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 GBP2P32456 591 aaPredicted RBP12.5□□□□□ -0.41
SNCA-202ENST00000345009 SOX5P35711 763 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 GPR15P49685 360 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 KLK7P49862 253 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 PDE6CP51160 858 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 FIGNQ5HY92 759 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 SDHAF4Q5VUM1 108 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 DPY19L2P1Q6NXN4 242 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 CLEC20AQ6ZU45 233 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 ADHFE1Q8IWW8 467 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 TDRD5Q8NAT2 981 aaKnown RBP12.5□□□□□ -0.41
SNCA-202ENST00000345009 PDZD8Q8NEN9 1154 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 MRPS31Q92665 395 aaKnown RBP12.5□□□□□ -0.41
SNCA-202ENST00000345009 RPGRIP1Q96KN7 1286 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 NOX5Q96PH1 765 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 SMOQ99835 787 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 XPO4Q9C0E2 1151 aaKnown RBP12.5□□□□□ -0.41
SNCA-202ENST00000345009 ATXN3LQ9H3M9 355 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 SLITRK6Q9H5Y7 841 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 LRRC4Q9HBW1 653 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 HCFC1R1Q9NWW0 138 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 TRPM5Q9NZQ8 1165 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 CDH7Q9ULB5 785 aa12.5□□□□□ -0.41
SNCA-202ENST00000345009 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.5□□□□□ -0.41
SNCA-202ENST00000345009 MYH10P35580 1976 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 XPO1O14980 1071 aaKnown RBP12.49□□□□□ -0.41
SNCA-202ENST00000345009 GFPT2O94808 682 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 IL9P15248 144 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 CYP11B1P15538 503 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 FERP16591 822 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 HMGA1P17096 107 aaKnown RBP12.49□□□□□ -0.41
SNCA-202ENST00000345009 DDX6P26196 483 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNCA-202ENST00000345009 GABRR2P28476 465 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 CLCN1P35523 988 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 PRSS12P56730 875 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 NTHL1P78549 312 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 TRIM14Q14142 442 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 SARM1Q6SZW1 724 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 GET4Q7L5D6 327 aaPredicted RBP12.49□□□□□ -0.41
SNCA-202ENST00000345009 ZNF677Q86XU0 584 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 STKLD1Q8NE28 680 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 STK32AQ8WU08 396 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 OVCA2Q8WZ82 227 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 TFAP2BQ92481 460 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 HSFY1Q96LI6 401 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 TTLL2Q9BWV7 592 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 RBSNQ9H1K0 784 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 LUC7L2Q9Y383 392 aaKnown RBP12.49□□□□□ -0.41
SNCA-202ENST00000345009 UNC80Q8N2C7 3258 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 C5orf42Q9H799 3197 aa12.49□□□□□ -0.41
SNCA-202ENST00000345009 TTC28Q96AY4 2481 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 ITIH6Q6UXX5 1313 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 A0A1W2PRU2 124 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 PFKLP17858 780 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 ACADSBP45954 432 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 PLA2G4AP47712 749 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 SLC5A3P53794 718 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 CACNA2D1P54289 1103 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms