RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 CD101Q93033 1021 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 ELMO3Q96BJ8 720 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 SCAND2PQ9GZW5 306 aaPredicted RBP13.22□□□□□ -0.29
SGCA-202ENST00000344627 DPEP3Q9H4B8 488 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 GDPD2Q9HCC8 539 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.22□□□□□ -0.29
SGCA-202ENST00000344627 VPS45Q9NRW7 570 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 DUS2Q9NX74 493 aaKnown RBP13.22□□□□□ -0.29
SGCA-202ENST00000344627 TRPM5Q9NZQ8 1165 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 ARHGAP26Q9UNA1 814 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 MAPK8IP1Q9UQF2 711 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 CEP250Q9BV73 2442 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 ATP8B3O60423 1300 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 C2orf78A6NCI8 922 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 F8VP50 259 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 PDXKO00764 312 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 SLC9A3R1O14745 358 aaPredicted RBP13.21□□□□□ -0.29
SGCA-202ENST00000344627 AXIN1O15169 862 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 TADA3O75528 432 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 APBB3O95704 486 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 P4HA1P13674 534 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 GJA4P35212 333 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 GALK1P51570 392 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 DMWDQ09019 674 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 USP4Q13107 963 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 ZNF77Q15935 545 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 PREPLQ4J6C6 727 aaPredicted RBP13.21□□□□□ -0.29
SGCA-202ENST00000344627 PPM1JQ5JR12 505 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 WDR44Q5JSH3 913 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 TDRD10Q5VZ19 366 aaKnown RBP13.21□□□□□ -0.29
SGCA-202ENST00000344627 HEATR6Q6AI08 1181 aaKnown RBP13.21□□□□□ -0.29
SGCA-202ENST00000344627 PLEKHO2Q8TD55 490 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 SLC22A12Q96S37 553 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 XYLT2Q9H1B5 865 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 KCTD10Q9H3F6 313 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 SMYD3Q9H7B4 428 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 DMAC2Q9NW81 257 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 HPSEQ9Y251 543 aa13.21□□□□□ -0.29
SGCA-202ENST00000344627 GOLGA6L4A6NEF3 574 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 RNF40O75150 1001 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 C4BPAP04003 597 aaKnown RBP13.2□□□□□ -0.3
SGCA-202ENST00000344627 EIF2DP41214 584 aaKnown RBP13.2□□□□□ -0.3
SGCA-202ENST00000344627 PIK3CAP42336 1068 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 DPP6P42658 865 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 DLG4P78352 724 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 BECN1Q14457 450 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 PLA2G2CQ5R387 149 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 DDX42Q86XP3 938 aaKnown RBP eCLIP13.2□□□□□ -0.3
SGCA-202ENST00000344627 SLC9A9Q8IVB4 645 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 SH3RF2Q8TEC5 729 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 CCDC34Q96HJ3 373 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 CNTNAP3BQ96NU0 1288 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 B3GNT5Q9BYG0 378 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 CNTNAP3Q9BZ76 1288 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 ZNF518BQ9C0D4 1074 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 ELOVL4Q9GZR5 314 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 GZF1Q9H116 711 aaPredicted RBP13.2□□□□□ -0.3
SGCA-202ENST00000344627 MMRN2Q9H8L6 949 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 NME7Q9Y5B8 376 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 WNT6Q9Y6F9 365 aa13.2□□□□□ -0.3
SGCA-202ENST00000344627 ZNF202O95125 648 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 STAU1O95793 577 aaKnown RBP13.19□□□□□ -0.3
SGCA-202ENST00000344627 EGFP01133 1207 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 KRT13P13646 458 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 USP46P62068 366 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 NOP14P78316 857 aaKnown RBP13.19□□□□□ -0.3
SGCA-202ENST00000344627 MRPS21P82921 87 aaKnown RBP13.19□□□□□ -0.3
SGCA-202ENST00000344627 SGSM1Q2NKQ1 1148 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 EML3Q32P44 896 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 USP39Q53GS9 565 aaKnown RBP13.19□□□□□ -0.3
SGCA-202ENST00000344627 KRBA2Q6ZNG9 492 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 RIN3Q8TB24 985 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 TMC2Q8TDI7 906 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 OVCA2Q8WZ82 227 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 TNIP3Q96KP6 325 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 C8orf48Q96LL4 319 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 SLITRK1Q96PX8 696 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 DUSP9Q99956 384 aaKnown RBP13.19□□□□□ -0.3
SGCA-202ENST00000344627 TTLL2Q9BWV7 592 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 ARRDC1-AS1Q9H2J1 176 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 GOLPH3LQ9H4A5 285 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 GCNT4Q9P109 453 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 SDK1Q7Z5N4 2213 aa13.19□□□□□ -0.3
SGCA-202ENST00000344627 RALGAPA1Q6GYQ0 2036 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 HELZP42694 1942 aaKnown RBP13.18□□□□□ -0.3
SGCA-202ENST00000344627 A0A1W2PQ27 194 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 A0A1W2PQ64 194 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 A0A1W2PQD8 194 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 OTOL1A6NHN0 477 aaPredicted RBP13.18□□□□□ -0.3
SGCA-202ENST00000344627 ALDH1A2O94788 518 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 RHOBTB3O94955 611 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 VNN1O95497 513 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 NR2F2P24468 414 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 RPL13P26373 211 aaKnown RBP13.18□□□□□ -0.3
SGCA-202ENST00000344627 YWHAQP27348 245 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 VAMP7P51809 220 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 CACNA2D1P54289 1103 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 SLC7A9P82251 487 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 SHC2P98077 582 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 DPYDQ12882 1025 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms