RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 KIF12Q96FN5 646 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 CMTM6Q9NX76 183 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 IL5RAQ01344 420 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 DGKDQ16760 1214 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 BRINP3Q76B58 766 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 SLC44A2Q8IWA5 706 aaPredicted RBP18.2■□□□□ 0.5
SMAD4-201ENST00000342988 SCAIQ8N9R8 606 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 PAGE5Q96GU1 130 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 Q96MT0 163 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 ZNF302Q9NR11 478 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 RAPGEF6Q8TEU7 1601 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 UBE3CQ15386 1083 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 PFKFB3Q16875 520 aaPredicted RBP18.2■□□□□ 0.5
SMAD4-201ENST00000342988 DCAF4Q8WV16 495 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 CINPQ9BW66 212 aaPredicted RBP18.2■□□□□ 0.5
SMAD4-201ENST00000342988 KIAA0391O15091 583 aaKnown RBP18.2■□□□□ 0.5
SMAD4-201ENST00000342988 NANOGNBQ7Z5D8 188 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 PIK3C3Q8NEB9 887 aa18.2■□□□□ 0.5
SMAD4-201ENST00000342988 LBHD1Q9BQE6 289 aaPredicted RBP18.2■□□□□ 0.5
SMAD4-201ENST00000342988 CHORDC1Q9UHD1 332 aaPredicted RBP18.2■□□□□ 0.5
SMAD4-201ENST00000342988 CCT8L1PA6NM43 557 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 SLC2A3P11169 496 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 PSMB9P28065 219 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 PTSQ03393 145 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 SPATA18Q8TC71 538 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 UCMAQ8WVF2 138 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 PABPC5Q96DU9 382 aaKnown RBP18.19■□□□□ 0.5
SMAD4-201ENST00000342988 AGAP3Q96P47 875 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 ALG13Q9NP73 1137 aaKnown RBP18.19■□□□□ 0.5
SMAD4-201ENST00000342988 H3BN98 237 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 HS6ST1O60243 411 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 ANXA9O76027 345 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 UBA1P22314 1058 aaKnown RBP18.19■□□□□ 0.5
SMAD4-201ENST00000342988 PDX1P52945 283 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 GRIK3Q13003 919 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 HLA-DQA1Q5Y7H0 255 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 SLC22A9Q8IVM8 553 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 TIPINQ9BVW5 301 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 HOXC10Q9NYD6 342 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 ARHGEF10O15013 1369 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 CHURC1-FNTBB4DL54 471 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 IST1P53990 364 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 ANKMY2Q8IV38 441 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 TBCDQ9BTW9 1192 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 RGS10O43665 173 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 PPP1R37O75864 691 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 PLCL1Q15111 1095 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 PCSK7Q16549 785 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 KNOP1Q1ED39 458 aaKnown RBP18.19■□□□□ 0.5
SMAD4-201ENST00000342988 C1orf189Q5VU69 101 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 C11orf70Q9BRQ4 267 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 ACSL4O60488 711 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 NAPEPLDQ6IQ20 393 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 FAM213AQ9BRX8 229 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 ZNF232Q9UNY5 417 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 TEX14Q8IWB6 1497 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 ARAP1Q96P48 1450 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 MRC2Q9UBG0 1479 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 A0A088AWK7 358 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 ZBTB7BO15156 539 aaPredicted RBP18.19■□□□□ 0.5
SMAD4-201ENST00000342988 ZNF10P21506 573 aaPredicted RBP18.19■□□□□ 0.5
SMAD4-201ENST00000342988 BCAMP50895 628 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 BARGINQ6ZT62 677 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 SMYD1Q8NB12 490 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 BTG4Q9NY30 223 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 PPEF1O14829 653 aaPredicted RBP18.19■□□□□ 0.5
SMAD4-201ENST00000342988 ULK1O75385 1050 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 LRRC17Q8N6Y2 441 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 REPS1Q96D71 796 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 XPR1Q9UBH6 696 aa18.19■□□□□ 0.5
SMAD4-201ENST00000342988 IGF1RP08069 1367 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 FASP25445 335 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 UBXN2AP68543 259 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 SEL1L3Q68CR1 1132 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 MRNIPQ6NTE8 343 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 COLGALT2Q8IYK4 626 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 IP6K1Q92551 441 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 NACC2Q96BF6 587 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 TRIM2Q9C040 744 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 CLUP10909 449 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 ITIH4Q14624 930 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 OASLQ15646 514 aaKnown RBP18.18■□□□□ 0.5
SMAD4-201ENST00000342988 USPL1Q5W0Q7 1092 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 AGMOQ6ZNB7 445 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 ARHGAP22Q7Z5H3 698 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 GATAD2AQ86YP4 633 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 SAMSN1Q9NSI8 373 aaKnown RBP18.18■□□□□ 0.5
SMAD4-201ENST00000342988 AP3M1Q9Y2T2 418 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 DGKIO75912 1065 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 KRT33AO76009 404 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 HSD3B1P14060 373 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 TSHZ1Q6ZSZ6 1077 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 OR52L1Q8NGH7 329 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 PPP1R14BQ96C90 147 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 FAM210AQ96ND0 272 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 MAGEB3O15480 346 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 PDHA2P29803 388 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 SRP54P61011 504 aaKnown RBP18.18■□□□□ 0.5
SMAD4-201ENST00000342988 MPP2Q14168 576 aa18.18■□□□□ 0.5
SMAD4-201ENST00000342988 PDIA6Q15084 440 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms