RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 C10orf53Q8N6V4 93 aa15.54■□□□□ 0.08
UBE3B-202ENST00000342494 MAGEB10Q96LZ2 347 aaPredicted RBP15.54■□□□□ 0.08
UBE3B-202ENST00000342494 NDEL1Q9GZM8 345 aa15.54■□□□□ 0.08
UBE3B-202ENST00000342494 SYTL2Q9HCH5 934 aa15.54■□□□□ 0.08
UBE3B-202ENST00000342494 CNTNAP2Q9UHC6 1331 aa15.54■□□□□ 0.08
UBE3B-202ENST00000342494 CXCL8P10145 99 aa15.54■□□□□ 0.08
UBE3B-202ENST00000342494 COILP38432 576 aaPredicted RBP15.54■□□□□ 0.08
UBE3B-202ENST00000342494 PRIM2P49643 509 aa15.54■□□□□ 0.08
UBE3B-202ENST00000342494 TKTL1P51854 596 aa15.54■□□□□ 0.08
UBE3B-202ENST00000342494 ATXN3P54252 364 aaPredicted RBP15.54■□□□□ 0.08
UBE3B-202ENST00000342494 LRIG3Q6UXM1 1119 aa15.54■□□□□ 0.08
UBE3B-202ENST00000342494 UNC45BQ8IWX7 931 aa15.54■□□□□ 0.08
UBE3B-202ENST00000342494 KCNK16Q96T55 309 aa15.54■□□□□ 0.08
UBE3B-202ENST00000342494 CYP3A43Q9HB55 503 aa15.54■□□□□ 0.08
UBE3B-202ENST00000342494 RAD51CO43502 376 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 KLHL2O95198 593 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 IMPDH2P12268 514 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 GPC1P35052 558 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 RAD23BP54727 409 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 KCNT1Q5JUK3 1230 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 LRRC8BQ6P9F7 803 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 TADA1Q96BN2 335 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 TMEM176AQ96HP8 235 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 SYT15Q9BQS2 421 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 IL1RL2Q9HB29 575 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 VTA1Q9NP79 307 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 TIMM13Q9Y5L4 95 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-202ENST00000342494 CLTCQ00610 1675 aaKnown RBP15.53■□□□□ 0.08
UBE3B-202ENST00000342494 PGM5Q15124 567 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 KHDRBS2Q5VWX1 349 aaKnown RBP15.53■□□□□ 0.08
UBE3B-202ENST00000342494 ERGIC2Q96RQ1 377 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 MRPL9Q9BYD2 267 aaKnown RBP15.53■□□□□ 0.08
UBE3B-202ENST00000342494 ZNF518BQ9C0D4 1074 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 GPATCH2LQ9NWQ4 482 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 SMARCAL1Q9NZC9 954 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 GGT7Q9UJ14 662 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 EIF3LQ9Y262 564 aaKnown RBP15.53■□□□□ 0.08
UBE3B-202ENST00000342494 CDC42BPAQ5VT25 1732 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 HNRNPRO43390 633 aaKnown RBP15.53■□□□□ 0.08
UBE3B-202ENST00000342494 TRIM16O95361 564 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 CRTAMO95727 393 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 IL1R1P14778 569 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 BST2Q10589 180 aaKnown RBP15.53■□□□□ 0.08
UBE3B-202ENST00000342494 FAM171A1Q5VUB5 890 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 ANKS6Q68DC2 871 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 DENND1BQ6P3S1 775 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 ERP44Q9BS26 406 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 ADGRE3Q9BY15 652 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 CELF4Q9BZC1 486 aaKnown RBP15.53■□□□□ 0.08
UBE3B-202ENST00000342494 FBXL21Q9UKT6 434 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 CTDNEP1O95476 244 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 PON1P27169 355 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 ANXA11P50995 505 aaKnown RBP15.53■□□□□ 0.08
UBE3B-202ENST00000342494 MYL6P60660 151 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 AASDHQ4L235 1098 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-202ENST00000342494 CACHD1Q5VU97 1274 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 ZNF438Q7Z4V0 828 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 TMCO5AQ8N6Q1 288 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 PDGFCQ9NRA1 345 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 DYRK1BQ9Y463 629 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 NR2E3Q9Y5X4 410 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 CAMSAP1Q5T5Y3 1602 aa15.53■□□□□ 0.08
UBE3B-202ENST00000342494 SUPT7LO94864 414 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 GIT2Q14161 759 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 C2CD6Q53TS8 623 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 RPAINQ86UA6 219 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 TMC2Q8TDI7 906 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 ATXN3LQ9H3M9 355 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 WDR41Q9HAD4 459 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 AP4E1Q9UPM8 1137 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 PPP1R3GB7ZBB8 358 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 TBC1D4O60343 1298 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 XYLBO75191 536 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 GYPCP04921 128 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 SLC13A5Q86YT5 568 aaPredicted RBP15.52■□□□□ 0.08
UBE3B-202ENST00000342494 CCDC33Q8N5R6 958 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 TNIP2Q8NFZ5 429 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 E2F7Q96AV8 911 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 CDCA5Q96FF9 252 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 P2RX7Q99572 595 aaKnown RBP15.52■□□□□ 0.08
UBE3B-202ENST00000342494 POP1Q99575 1024 aaKnown RBP15.52■□□□□ 0.08
UBE3B-202ENST00000342494 FRMD8P1Q9BZ68 369 aaPredicted RBP15.52■□□□□ 0.08
UBE3B-202ENST00000342494 ITGA11Q9UKX5 1188 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 TAF6LQ9Y6J9 622 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 DLC1Q96QB1 1528 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 CYTH1Q15438 398 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 CMTM5Q96DZ9 223 aa15.52■□□□□ 0.08
UBE3B-202ENST00000342494 ASCC2Q9H1I8 757 aaPredicted RBP15.52■□□□□ 0.08
UBE3B-202ENST00000342494 NCF1BA6NI72 391 aaPredicted RBP15.52■□□□□ 0.07
UBE3B-202ENST00000342494 NCF1CA8MVU1 366 aaPredicted RBP15.52■□□□□ 0.07
UBE3B-202ENST00000342494 TRIM49D1C9J1S8 452 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 WNT10BO00744 389 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 CAND2O75155 1236 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 NCF1P14598 390 aaPredicted RBP15.52■□□□□ 0.07
UBE3B-202ENST00000342494 CYP11B1P15538 503 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 IGFBP4P22692 258 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 PTPN11Q06124 597 aaPredicted RBP15.52■□□□□ 0.07
UBE3B-202ENST00000342494 PTGISQ16647 500 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 RETSATQ6NUM9 610 aa15.52■□□□□ 0.07
UBE3B-202ENST00000342494 DIS3LQ8TF46 1054 aaKnown RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms