RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 SEZ6Q53EL9 994 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 SDE2Q6IQ49 451 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 FAM43BQ6ZT52 329 aaPredicted RBP7.92□□□□□ -1.14
HIPK1-201ENST00000340480 SCG3Q8WXD2 468 aaKnown RBP7.92□□□□□ -1.14
HIPK1-201ENST00000340480 FZD8Q9H461 694 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.92□□□□□ -1.14
HIPK1-201ENST00000340480 NOCTQ9UK39 431 aaKnown RBP7.92□□□□□ -1.14
HIPK1-201ENST00000340480 CFAP73A6NFT4 308 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 DNALI1O14645 258 aaPredicted RBP7.92□□□□□ -1.14
HIPK1-201ENST00000340480 EFCAB14O75071 495 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 NUDT17P0C025 328 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 MMP8P22894 467 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 C16orf72Q14CZ0 275 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 NUDCD1Q96RS6 583 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 TSPAN16Q9UKR8 245 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 USP18Q9UMW8 372 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 DOLKQ9UPQ8 538 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 ORC6Q9Y5N6 252 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 KCNN4O15554 427 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 CHEK2O96017 543 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 ZNF286BP0CG31 522 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 RARAP10276 462 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 LCP1P13796 627 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 NR2C2P49116 596 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 WDR75Q8IWA0 830 aaKnown RBP7.92□□□□□ -1.14
HIPK1-201ENST00000340480 C12orf50Q8NA57 414 aaPredicted RBP7.92□□□□□ -1.14
HIPK1-201ENST00000340480 SH3TC2Q8TF17 1288 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 LRRC39Q96DD0 335 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 L3MBTL3Q96JM7 780 aaPredicted RBP7.92□□□□□ -1.14
HIPK1-201ENST00000340480 LRGUKQ96M69 825 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 GPBP1L1Q9HC44 474 aaPredicted RBP7.92□□□□□ -1.14
HIPK1-201ENST00000340480 KANSL3Q9P2N6 904 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 CPA4Q9UI42 421 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 EEF2KO00418 725 aaKnown RBP7.92□□□□□ -1.14
HIPK1-201ENST00000340480 ATXN8OSP0DMR3 200 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 RFC1P35251 1148 aaPredicted RBP7.92□□□□□ -1.14
HIPK1-201ENST00000340480 NDST1P52848 882 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 PTGISQ16647 500 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 CCDC38Q502W7 563 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 ARRDC4Q8NCT1 418 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 LRRC15Q8TF66 581 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 OSMRQ99650 979 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 CATSPERBQ9H7T0 1116 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 SYNDIG1Q9H7V2 258 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 CHST12Q9NRB3 414 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 RAB6BQ9NRW1 208 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 USP20Q9Y2K6 914 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 BNIP3LO60238 219 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 ABHD2P08910 425 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 FAM163BP0C2L3 166 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 CYP2C18P33260 490 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 GYS2P54840 703 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 FSCN1Q16658 493 aaKnown RBP7.92□□□□□ -1.14
HIPK1-201ENST00000340480 KYNUQ16719 465 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 FAM187BQ17R55 369 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 HSDL1Q3SXM5 330 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 BBS12Q6ZW61 710 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 HOMEZQ8IX15 550 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 KLHL29Q96CT2 875 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 CLMNQ96JQ2 1002 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 CCT8L2Q96SF2 557 aa7.92□□□□□ -1.14
HIPK1-201ENST00000340480 CYBBP04839 570 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 EDNRBP24530 442 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 PAPOLAP51003 745 aaKnown RBP7.91□□□□□ -1.14
HIPK1-201ENST00000340480 CRYBB1P53674 252 aaPredicted RBP7.91□□□□□ -1.14
HIPK1-201ENST00000340480 SLC6A3Q01959 620 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 CYP4A22Q5TCH4 519 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 TTC19Q6DKK2 380 aaPredicted RBP7.91□□□□□ -1.14
HIPK1-201ENST00000340480 ZC3H18Q86VM9 953 aaKnown RBP7.91□□□□□ -1.14
HIPK1-201ENST00000340480 CDR2LQ86X02 465 aaPredicted RBP7.91□□□□□ -1.14
HIPK1-201ENST00000340480 NLGN2Q8NFZ4 835 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 ACTL9Q8TC94 416 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 RXFP2Q8WXD0 754 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 CFAP36Q96G28 342 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 ZNF446Q9NWS9 450 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 ZC3H7BQ9UGR2 993 aaKnown RBP7.91□□□□□ -1.14
HIPK1-201ENST00000340480 ACTL7BQ9Y614 415 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.91□□□□□ -1.14
HIPK1-201ENST00000340480 HACD1B0YJ81 288 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 CYP1A1P04798 512 aaPredicted RBP7.91□□□□□ -1.14
HIPK1-201ENST00000340480 LIG3P49916 1009 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 OTUD4Q01804 1114 aaKnown RBP7.91□□□□□ -1.14
HIPK1-201ENST00000340480 E2F5Q15329 346 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 DUPD1Q68J44 220 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 ACOT1Q86TX2 421 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 TAB3Q8N5C8 712 aaPredicted RBP7.91□□□□□ -1.14
HIPK1-201ENST00000340480 UROC1Q96N76 676 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 DNAJC17Q9NVM6 304 aaKnown RBP7.91□□□□□ -1.14
HIPK1-201ENST00000340480 MORF4L1Q9UBU8 362 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 XPO7Q9UIA9 1087 aaKnown RBP7.91□□□□□ -1.14
HIPK1-201ENST00000340480 MEFVO15553 781 aaPredicted RBP7.91□□□□□ -1.14
HIPK1-201ENST00000340480 KCNA3P22001 575 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 CNTFP26441 200 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 ZNF143P52747 638 aaPredicted RBP7.91□□□□□ -1.14
HIPK1-201ENST00000340480 ZKSCAN8Q15776 578 aaPredicted RBP7.91□□□□□ -1.14
HIPK1-201ENST00000340480 MMEL1Q495T6 779 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 CHADLQ6NUI6 762 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 ANKS3Q6ZW76 656 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 CRLF3Q8IUI8 442 aa7.91□□□□□ -1.14
HIPK1-201ENST00000340480 SCN4BQ8IWT1 228 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms