RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 TTC30AQ86WT1 665 aa16.12■□□□□ 0.17
UBE3B-201ENST00000340074 CMTM8Q8IZV2 173 aa16.12■□□□□ 0.17
UBE3B-201ENST00000340074 ANKRD52Q8NB46 1076 aa16.12■□□□□ 0.17
UBE3B-201ENST00000340074 TFAP2BQ92481 460 aa16.12■□□□□ 0.17
UBE3B-201ENST00000340074 SLITRK1Q96PX8 696 aa16.12■□□□□ 0.17
UBE3B-201ENST00000340074 TRPV4Q9HBA0 871 aa16.12■□□□□ 0.17
UBE3B-201ENST00000340074 IL37Q9NZH6 218 aa16.12■□□□□ 0.17
UBE3B-201ENST00000340074 ZMYM5Q9UJ78 669 aa16.12■□□□□ 0.17
UBE3B-201ENST00000340074 C2orf78A6NCI8 922 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 O00370 1275 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 SRFP11831 508 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 BRD2P25440 801 aaKnown RBP16.11■□□□□ 0.17
UBE3B-201ENST00000340074 VITQ6UXI7 678 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 APTXQ7Z2E3 356 aaKnown RBP16.11■□□□□ 0.17
UBE3B-201ENST00000340074 MON1AQ86VX9 555 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 FBXO32Q969P5 355 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 RSPRY1Q96DX4 576 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 ZSWIM1Q9BR11 485 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 LSM14BQ9BX40 385 aaKnown RBP16.11■□□□□ 0.17
UBE3B-201ENST00000340074 SMG9Q9H0W8 520 aaKnown RBP16.11■□□□□ 0.17
UBE3B-201ENST00000340074 TRPC7Q9HCX4 862 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 PNPLA8Q9NP80 782 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 COMMD8Q9NX08 183 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 TRPM5Q9NZQ8 1165 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 DNAJC12Q9UKB3 198 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 ZNF840PA6NDX5 716 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 LRRC10BA6NIK2 292 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 SOBPA7XYQ1 873 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 HEPACAM2A8MVW5 462 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 BECN2A8MW95 431 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 PRAMEF12O95522 483 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 ABL1P00519 1130 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 WEE1P30291 646 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 AVPR1AP37288 418 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 USP8P40818 1118 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 PPP3CCP48454 512 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 BCAT1P54687 386 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 GPC5P78333 572 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 SIGLEC14Q08ET2 396 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 GRM2Q14416 872 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 FKBP15Q5T1M5 1219 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 KLHDC7AQ5VTJ3 777 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 TRIM67Q6ZTA4 783 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 UBA3Q8TBC4 463 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 SHC3Q92529 594 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 E2F7Q96AV8 911 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 SLC22A12Q96S37 553 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 CYP2S1Q96SQ9 504 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 FBXO44Q9H4M3 255 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 CBX8Q9HC52 389 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 HESX1Q9UBX0 185 aa16.11■□□□□ 0.17
UBE3B-201ENST00000340074 CHORDC1Q9UHD1 332 aaPredicted RBP16.11■□□□□ 0.17
UBE3B-201ENST00000340074 COL4A2P08572 1712 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 TRAV19A0A0A6YYK7 116 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 FAM92AA1XBS5 289 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 FAM86C2PA6NEL3 165 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 LGALS16A8MUM7 142 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 TULP2O00295 520 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 CFHP08603 1231 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 KLK7P49862 253 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 SLC8A3P57103 927 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 UBXN1Q04323 297 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 PDE4CQ08493 712 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 CNGA2Q16280 664 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 LCLAT1Q6UWP7 414 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 PIGZQ86VD9 579 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 ARL14EPQ8N8R7 260 aaPredicted RBP16.1■□□□□ 0.17
UBE3B-201ENST00000340074 PDZD8Q8NEN9 1154 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 OVCA2Q8WZ82 227 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 LRRC3BQ96PB8 259 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 ACP6Q9NPH0 428 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 C11orf16Q9NQ32 467 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 GMIPQ9P107 970 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.1■□□□□ 0.17
UBE3B-201ENST00000340074 FHOD1Q9Y613 1164 aa16.1■□□□□ 0.17
UBE3B-201ENST00000340074 FOXN3O00409 490 aaPredicted RBP16.09■□□□□ 0.17
UBE3B-201ENST00000340074 DPYSL4O14531 572 aa16.09■□□□□ 0.17
UBE3B-201ENST00000340074 XPO1O14980 1071 aaKnown RBP16.09■□□□□ 0.17
UBE3B-201ENST00000340074 CKMP06732 381 aa16.09■□□□□ 0.17
UBE3B-201ENST00000340074 UCHL3P15374 230 aa16.09■□□□□ 0.17
UBE3B-201ENST00000340074 PSMC3P17980 439 aa16.09■□□□□ 0.17
UBE3B-201ENST00000340074 HDCP19113 662 aa16.09■□□□□ 0.17
UBE3B-201ENST00000340074 PGFP49763 221 aa16.09■□□□□ 0.17
UBE3B-201ENST00000340074 KIF11P52732 1056 aa16.09■□□□□ 0.17
UBE3B-201ENST00000340074 BST2Q10589 180 aaKnown RBP16.09■□□□□ 0.17
UBE3B-201ENST00000340074 RAPGEF1Q13905 1077 aa16.09■□□□□ 0.17
UBE3B-201ENST00000340074 PKDCCQ504Y2 493 aa16.09■□□□□ 0.17
UBE3B-201ENST00000340074 LUZP1Q86V48 1076 aa16.09■□□□□ 0.17
UBE3B-201ENST00000340074 MFSD6LQ8IWD5 586 aa16.09■□□□□ 0.17
UBE3B-201ENST00000340074 USP13Q92995 863 aaPredicted RBP16.09■□□□□ 0.17
UBE3B-201ENST00000340074 ASIC4Q96FT7 647 aa16.09■□□□□ 0.17
UBE3B-201ENST00000340074 TRMT61BQ9BVS5 477 aaKnown RBP16.09■□□□□ 0.17
UBE3B-201ENST00000340074 UBXN6Q9BZV1 441 aa16.09■□□□□ 0.17
UBE3B-201ENST00000340074 SLC2A4RGQ9NR83 387 aa16.09■□□□□ 0.17
UBE3B-201ENST00000340074 CCL26Q9Y258 94 aa16.09■□□□□ 0.17
UBE3B-201ENST00000340074 COL4A3Q01955 1670 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 TMEM221A6NGB7 291 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 M0QYV0 167 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 M0R296 226 aa16.08■□□□□ 0.16
UBE3B-201ENST00000340074 CYP26A1O43174 497 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms