RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 PLEKHH3Q7Z736 793 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 PACS2Q86VP3 889 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CDR2LQ86X02 465 aaPredicted RBP11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 PSTKQ8IV42 348 aaKnown RBP11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CYP4X1Q8N118 509 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 KCTD6Q8NC69 237 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ALKBH8Q96BT7 664 aaKnown RBP11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 KIF12Q96FN5 646 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 C9orf72Q96LT7 481 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 RNF157Q96PX1 679 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ACSS3Q9H6R3 686 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 PRKAG3Q9UGI9 489 aa11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GNEQ9Y223 722 aaKnown RBP11.22□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CCL15-CCL14A0A0B4J2E2 113 aa11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 BCLAF3A2AJT9 711 aaKnown RBP11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SMIM23A6NLE4 172 aa11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ASMTLO95671 621 aa11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CD4P01730 458 aa11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 IGHA2P01877 340 aa11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GSTA2P09210 222 aa11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 RPL22P35268 128 aaKnown RBP11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 VPS41P49754 854 aa11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 LIG3P49916 1009 aa11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SLC6A3Q01959 620 aa11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CCL15Q16663 113 aa11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ADGRD1Q6QNK2 874 aa11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 FAM183BPQ6ZVS7 135 aa11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CCDC13Q8IYE1 715 aa11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 OR6J1Q8NGC5 347 aa11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 UHMK1Q8TAS1 419 aaKnown RBP11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 APBB2Q92870 758 aa11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 KHSRPQ92945 711 aaKnown RBP eCLIP11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 PEBP4Q96S96 227 aa11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 NKIRAS1Q9NYS0 192 aa11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 PSMC3IPQ9P2W1 217 aaPredicted RBP11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 UBQLN1Q9UMX0 589 aaKnown RBP11.21□□□□□ -0.61
TRAF3IP2-201ENST00000340026 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.21□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PIRO00625 290 aa11.21□□□□□ -0.62
TRAF3IP2-201ENST00000340026 XPOTO43592 962 aaKnown RBP11.21□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ZSCAN5DPP0CG00 497 aa11.21□□□□□ -0.62
TRAF3IP2-201ENST00000340026 DARSP14868 501 aaKnown RBP11.21□□□□□ -0.62
TRAF3IP2-201ENST00000340026 MPP2Q14168 576 aa11.21□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ZFYVE27Q5T4F4 411 aa11.21□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TRNP1Q6NT89 227 aa11.21□□□□□ -0.62
TRAF3IP2-201ENST00000340026 DPH6Q7L8W6 267 aa11.21□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SLC26A9Q7LBE3 791 aa11.21□□□□□ -0.62
TRAF3IP2-201ENST00000340026 RXFP2Q8WXD0 754 aa11.21□□□□□ -0.62
TRAF3IP2-201ENST00000340026 RSAD2Q8WXG1 361 aa11.21□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ZBTB10Q96DT7 871 aa11.21□□□□□ -0.62
TRAF3IP2-201ENST00000340026 RABGEF1Q9UJ41 708 aa11.21□□□□□ -0.62
TRAF3IP2-201ENST00000340026 USP15Q9Y4E8 981 aaPredicted RBP11.21□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TRIP11Q15643 1979 aa11.21□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SCN1AP35498 2009 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CLUHO75153 1309 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 COL4A4P53420 1690 aaPredicted RBP11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 E5RJQ4 531 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TYROBPO43914 113 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ACADSBP45954 432 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 YARSP54577 528 aaKnown RBP11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 GEMIN4P57678 1058 aaKnown RBP11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 EIF3EP60228 445 aaKnown RBP11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 IL9RQ01113 521 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 KCNJ11Q14654 390 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 GALNTL6Q49A17 601 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CCDC14Q49A88 953 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 EMC1Q8N766 993 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 LRRC39Q96DD0 335 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 HSFY1Q96LI6 401 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PWWP2AQ96N64 755 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 FAM118BQ9BPY3 351 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ZWILCHQ9H900 591 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 HAUS2Q9NVX0 235 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PAK5Q9P286 719 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 RCOR3Q9P2K3 495 aaPredicted RBP11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CTNNAL1Q9UBT7 734 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 DCAF8L1A6NGE4 600 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 RASA4BC9J798 803 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 RASA4O43374 803 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PRPSAP2O60256 369 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 RBP3P10745 1247 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PDGFRAP16234 1089 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ZFXP17010 805 aaPredicted RBP11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 IL4RP24394 825 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SKIV2L2P42285 1042 aaKnown RBP11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SCTRP47872 440 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 GDF10P55107 478 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 GPX6P59796 221 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ROR1Q01973 937 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 RNASELQ05823 741 aaKnown RBP11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 MTFR1Q15390 333 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 DPYSL2Q16555 572 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CCDC38Q502W7 563 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 MORN1Q5T089 497 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 GJC2Q5T442 439 aaPredicted RBP11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 RNF43Q68DV7 783 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TTC30AQ86WT1 665 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 RFX6Q8HWS3 928 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 NME8Q8N427 588 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 MZB1Q8WU39 189 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 STARD13Q9Y3M8 1113 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms