RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 CSGALNACT1Q8TDX6 532 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 CFAP54Q96N23 3096 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 MED15Q96RN5 788 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 SMOQ99835 787 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 DUSP16Q9BY84 665 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 TRPV5Q9NQA5 729 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 HESX1Q9UBX0 185 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 NFE2L3Q9Y4A8 694 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 ZNF840PA6NDX5 716 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 KCNJ18B7U540 433 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 CLCN5P51795 746 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 MFAP3P55082 362 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 USP46P62068 366 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 FCHO2Q0JRZ9 810 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 KCNJ12Q14500 433 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 STILQ15468 1287 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 NFKBIBQ15653 356 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 MLF2Q15773 248 aaPredicted RBP11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 EXOC3L4Q17RC7 722 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 VWA3BQ502W6 1294 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 PPP1R26Q5T8A7 1209 aaPredicted RBP11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 PHLDB3Q6NSJ2 640 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 POTEHQ6S545 545 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 RRAGAQ7L523 313 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 IRF2BP1Q8IU81 584 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 LMO3Q8TAP4 145 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 PRRX2Q99811 253 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 TUBGCP2Q9BSJ2 902 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 UBXN6Q9BZV1 441 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 NDST4Q9H3R1 872 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 UBE2TQ9NPD8 197 aaPredicted RBP11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 TLR8Q9NR97 1041 aaKnown RBP11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 MRPS17Q9Y2R5 130 aaKnown RBP11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 NCANO14594 1321 aa11.97□□□□□ -0.49
SLC28A1-202ENST00000338602 MAN2B1O00754 1011 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 TNFRSF10BO14763 440 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 TADA3O75528 432 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 GLULP15104 373 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 NUBP1P53384 320 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 TCP11X2Q5H9J9 407 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 HECTD3Q5T447 861 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 SMYD5Q6GMV2 418 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 ASTLQ6HA08 431 aaPredicted RBP11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 CAVIN1Q6NZI2 390 aaKnown RBP11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 C1orf228Q6PIY5 440 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 CLEC20AQ6ZU45 233 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 GPIHBP1Q8IV16 184 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 ARL14EPQ8N8R7 260 aaPredicted RBP11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 ANKRD52Q8NB46 1076 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 MSANTD3Q96H12 275 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 NELL2Q99435 816 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 CRACR2AQ9BSW2 395 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 NACA2Q9H009 215 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 SAMSN1Q9NSI8 373 aaKnown RBP11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 TMEM30AQ9NV96 361 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 IL37Q9NZH6 218 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 CHORDC1Q9UHD1 332 aaPredicted RBP11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 SPTBN4Q9H254 2564 aa11.96□□□□□ -0.49
SLC28A1-202ENST00000338602 PTPRDP23468 1912 aa11.96□□□□□ -0.5
SLC28A1-202ENST00000338602 KRBA1A5PL33 1030 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 NCAM2O15394 837 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 BEST1O76090 585 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 PRAMEF12O95522 483 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 KRT5P13647 590 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 CDK11BP21127 795 aaKnown RBP11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 ACO1P21399 889 aaKnown RBP11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 AVPR2P30518 371 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 PSEN1P49768 467 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 KPNA1P52294 538 aaPredicted RBP11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 BCAT1P54687 386 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 STARD6P59095 220 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 AMPD2Q01433 879 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 MYL5Q02045 173 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 TYRO3Q06418 890 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 GOLGA7BQ2TAP0 167 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 HSP90AA4PQ58FG1 418 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 TRIM65Q6PJ69 517 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 ZNF852Q6ZMS4 543 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 TADA2BQ86TJ2 420 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 DDX42Q86XP3 938 aaKnown RBP eCLIP11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 ARHGEF19Q8IW93 802 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 RBBP8NLQ8NC74 664 aaPredicted RBP11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 TTC16Q8NEE8 873 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 ZMIZ2Q8NF64 920 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 SCAMP5Q8TAC9 235 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 USP13Q92995 863 aaPredicted RBP11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 EXOC4Q96A65 974 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 CYP2S1Q96SQ9 504 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 PHOX2BQ99453 314 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 SMG9Q9H0W8 520 aaKnown RBP11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 C8orf33Q9H7E9 229 aaPredicted RBP11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 TBC1D17Q9HA65 648 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 TMEM63CQ9P1W3 806 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 APEX2Q9UBZ4 518 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 TSPAN16Q9UKR8 245 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 ARHGAP26Q9UNA1 814 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 SCML2Q9UQR0 700 aa11.95□□□□□ -0.5
SLC28A1-202ENST00000338602 KANSL1LA0AUZ9 987 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 FAM92AA1XBS5 289 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 C2orf78A6NCI8 922 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms