RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 C3orf70A6NLC5 250 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-202ENST00000338368 IFI35P80217 286 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-202ENST00000338368 SKOR1P84550 965 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 POU5F1BQ06416 359 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 ZBTB41Q5SVQ8 909 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 LVRNQ6Q4G3 990 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 NRCAMQ92823 1304 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 RECQL4O94761 1208 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 YY1P25490 414 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 FDFT1P37268 417 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 TFB1MQ8WVM0 346 aaKnown RBP6.55□□□□□ -1.36
PRKDC-202ENST00000338368 PFDN4Q9NQP4 134 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 FGFR1OP2Q9NVK5 253 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 DUOX1Q9NRD9 1551 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 TXNDC9O14530 226 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 MTSS1O43312 755 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 POLBP06746 335 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 HMBSP08397 361 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 INHBEP58166 350 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 KCTD19Q17RG1 926 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-202ENST00000338368 TTMPQ5BVD1 217 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 SPDYCQ5MJ68 293 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 XPNPEP3Q9NQH7 507 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 ZFP69BQ9UJL9 534 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 NOCTQ9UK39 431 aaKnown RBP6.55□□□□□ -1.36
PRKDC-202ENST00000338368 TRIM49D1C9J1S8 452 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 SLC4A1P02730 911 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 PTK6Q13882 451 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 C4orf50Q6ZRC1 276 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 RNF180Q86T96 592 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 RASSF3Q86WH2 238 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 GSDMBQ8TAX9 411 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 MAGEB5Q9BZ81 275 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 USH1CQ9Y6N9 552 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 LTN1O94822 1766 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 ROBO1Q9Y6N7 1651 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 CCDC160A6NGH7 325 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 SIGLEC16A6NMB1 481 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 FANCGO15287 622 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 GMNNO75496 209 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 HOXD13P35453 343 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 SESN3P58005 492 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 ERVK-5Q9HDB9 667 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 PSMD3O43242 534 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 ARL2P36404 184 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 PRAMEP78395 509 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 BEX3Q00994 111 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 MREGQ8N565 214 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 DCLK2Q8N568 766 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 PCSK9Q8NBP7 692 aaKnown RBP6.54□□□□□ -1.36
PRKDC-202ENST00000338368 PDCD6IPQ8WUM4 868 aaKnown RBP6.54□□□□□ -1.36
PRKDC-202ENST00000338368 CRYGNQ8WXF5 182 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 PABPC5Q96DU9 382 aaKnown RBP6.54□□□□□ -1.36
PRKDC-202ENST00000338368 C2CD2Q9Y426 696 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 GOLGA8QA0A0J9YX86 632 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 GOLGA8OA6NCC3 632 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 GOLGA8NF8WBI6 632 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 TKTL1P51854 596 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 TAS2R40P59535 323 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 NOL9Q5SY16 702 aaKnown RBP6.54□□□□□ -1.36
PRKDC-202ENST00000338368 ERMARDQ5T6L9 678 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 TTC39BQ5VTQ0 682 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-202ENST00000338368 RAB44Q7Z6P3 723 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-202ENST00000338368 SYT15Q9BQS2 421 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 C10orf88Q9H8K7 445 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 XAB2Q9HCS7 855 aaKnown RBP6.54□□□□□ -1.36
PRKDC-202ENST00000338368 CCDC78A2IDD5 438 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 BNIP3LO60238 219 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 GRM5P41594 1212 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 MROH9Q5TGP6 573 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 OR6P1Q8NGX9 317 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 DDX23Q9BUQ8 820 aaKnown RBP6.54□□□□□ -1.36
PRKDC-202ENST00000338368 ZMYM2Q9UBW7 1377 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 KPNA6O60684 536 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 SP2Q02086 613 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 PDK1Q15118 436 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 PLEKHA7Q6IQ23 1121 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 VCXQ9H320 206 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 APOBEC3GQ9HC16 384 aaKnown RBP6.54□□□□□ -1.36
PRKDC-202ENST00000338368 APOC4-APOC2K7ER74 178 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 APOC2P02655 101 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 NFICP08651 508 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 KRT4P19013 534 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 SPRP35270 261 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-202ENST00000338368 STX1BP61266 288 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 MMEL1Q495T6 779 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 DUSP28Q4G0W2 176 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 TRIM68Q6AZZ1 485 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 CXCL17Q6UXB2 119 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 CCNJLQ8IV13 435 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 SCG3Q8WXD2 468 aaKnown RBP6.54□□□□□ -1.36
PRKDC-202ENST00000338368 FZD8Q9H461 694 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 SLC24A2Q9UI40 661 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 CCDC22O60826 627 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 RPLP2P05387 115 aaKnown RBP6.54□□□□□ -1.36
PRKDC-202ENST00000338368 MAP2K2P36507 400 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 NAPEPLDQ6IQ20 393 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 UNC93AQ86WB7 457 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 MTG1Q9BT17 334 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-202ENST00000338368 GRID1Q9ULK0 1009 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms