RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ZC3H4Q9UPT8 1303 aaKnown RBP14.24□□□□□ -0.13
RTN4-202ENST00000337526 DEPDC5O75140 1603 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 SMIM22K7EJ46 135 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 MAPTP10636 758 aaKnown RBP14.24□□□□□ -0.13
RTN4-202ENST00000337526 RALBP11234 206 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 PECAM1P16284 738 aaPredicted RBP14.24□□□□□ -0.13
RTN4-202ENST00000337526 TAL1P17542 331 aaPredicted RBP14.24□□□□□ -0.13
RTN4-202ENST00000337526 SERPINB5P36952 375 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 GCNT1Q02742 428 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 BMPR2Q13873 1038 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 PACS2Q86VP3 889 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 FAM131BQ86XD5 332 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 ATXN2LQ8WWM7 1075 aaKnown RBP14.24□□□□□ -0.13
RTN4-202ENST00000337526 LZICQ8WZA0 190 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 ZBED2Q9BTP6 218 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 AGO4Q9HCK5 861 aaKnown RBP14.24□□□□□ -0.13
RTN4-202ENST00000337526 FARP1Q9Y4F1 1045 aaPredicted RBP14.24□□□□□ -0.13
RTN4-202ENST00000337526 NWD1Q149M9 1564 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 GRK2P25098 689 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 PLOD1Q02809 727 aaPredicted RBP14.24□□□□□ -0.13
RTN4-202ENST00000337526 SH3KBP1Q96B97 665 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 TBC1D23Q9NUY8 699 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 PKP3Q9Y446 797 aa14.24□□□□□ -0.13
RTN4-202ENST00000337526 DNALI1O14645 258 aaPredicted RBP14.23□□□□□ -0.13
RTN4-202ENST00000337526 KLRC4O43908 158 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 SSTR1P30872 391 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 KLK14Q9P0G3 267 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 RCCD1A6NED2 376 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 EML1O00423 815 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 EPHB6O15197 1021 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 DEAF1O75398 565 aaPredicted RBP14.23□□□□□ -0.13
RTN4-202ENST00000337526 ATP6V1E1P36543 226 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 PRKCIP41743 596 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 CBWD6Q4V339 395 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 CBWD3Q5JTY5 395 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 CBWD5Q5RIA9 395 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 OLFML2BQ68BL8 750 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 WDR49Q8IV35 697 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 TAGAPQ8N103 731 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 SAMD3Q8N6K7 520 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 DCUN1D1Q96GG9 259 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 ZMAT2Q96NC0 199 aaKnown RBP14.23□□□□□ -0.13
RTN4-202ENST00000337526 DNAJC18Q9H819 358 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 CHST12Q9NRB3 414 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 SYNDIG1LA6NDD5 238 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 SYF2O95926 243 aaKnown RBP14.23□□□□□ -0.13
RTN4-202ENST00000337526 CHRM3P20309 590 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 ELK3P41970 407 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 GLRBP48167 497 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 DMC1Q14565 340 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 AGAP9Q5VTM2 703 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 TCP10LQ8TDR4 215 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 ELMO3Q96BJ8 720 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 VCPIP1Q96JH7 1222 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 RIC8BQ9NVN3 520 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 TAGLN3Q9UI15 199 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 TEKT2Q9UIF3 430 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 ADGRA2Q96PE1 1338 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 RRN3P2A6NIE6 340 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 TBC1D4O60343 1298 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 FKBP9O95302 570 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 MAP3K10Q02779 954 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 TWF1Q12792 350 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 ZC3H12BQ5HYM0 836 aaKnown RBP14.23□□□□□ -0.13
RTN4-202ENST00000337526 WLSQ5T9L3 541 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 MFSD7Q6UXD7 560 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 FKBP9P1Q75LS8 142 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 ELMOD1Q8N336 334 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 ZNF512Q96ME7 567 aaPredicted RBP14.23□□□□□ -0.13
RTN4-202ENST00000337526 APOL2Q9BQE5 337 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 KATNAL1Q9BW62 490 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 IRAK4Q9NWZ3 460 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 NINJ2Q9NZG7 142 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 V9GYQ6 96 aa14.23□□□□□ -0.13
RTN4-202ENST00000337526 CPA3P15088 417 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 TFE3P19532 575 aaPredicted RBP14.22□□□□□ -0.13
RTN4-202ENST00000337526 ATICP31939 592 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 NEK2P51955 445 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 BACE1P56817 501 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 TTMPQ5BVD1 217 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 TTC33Q6PID6 262 aaPredicted RBP14.22□□□□□ -0.13
RTN4-202ENST00000337526 SLFN11Q7Z7L1 901 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 TMEM176AQ96HP8 235 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 CNBD2Q96M20 576 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 DDX50Q9BQ39 737 aaKnown RBP14.22□□□□□ -0.13
RTN4-202ENST00000337526 PRKAG2Q9UGJ0 569 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 AP4E1Q9UPM8 1137 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 HNRNPCL2B2RXH8 293 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 STAG3L1P0CL83 205 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 ETFBP38117 255 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 TRPC1P48995 793 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 RGS4P49798 205 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 RPL10AP62906 217 aaKnown RBP14.22□□□□□ -0.13
RTN4-202ENST00000337526 KBTBD12Q3ZCT8 623 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 MIIPQ5JXC2 388 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 SEL1L3Q68CR1 1132 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 PTRHD1Q6GMV3 140 aaKnown RBP14.22□□□□□ -0.13
RTN4-202ENST00000337526 LRRC55Q6ZSA7 311 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 PXMP2Q9NR77 195 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 E7ENQ6 273 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms