RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 LPPQ93052 612 aa9.72□□□□□ -0.85
FNDC3B-201ENST00000336824 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.72□□□□□ -0.85
FNDC3B-201ENST00000336824 ARHGAP20Q9P2F6 1191 aa9.72□□□□□ -0.85
FNDC3B-201ENST00000336824 OR6C75A6NL08 312 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 RASGRF2O14827 1237 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 KRT38O76015 456 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 ATG7O95352 703 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 EDNRBP24530 442 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 CCND3P30281 292 aaPredicted RBP9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 PRKCIP41743 596 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 PRAMEP78395 509 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 EXD1Q8NHP7 514 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 PPP1R13LQ8WUF5 828 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 HSFY1Q96LI6 401 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 ZSWIM1Q9BR11 485 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 FRMD8Q9BZ67 464 aaPredicted RBP9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 TTC7AQ9ULT0 858 aaPredicted RBP9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 GOLGA8QA0A0J9YX86 632 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 GOLGA8OA6NCC3 632 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 GOLGA8NF8WBI6 632 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 OAS2P29728 719 aaKnown RBP9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 RFC2P35250 354 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 YWHAZP63104 245 aaKnown RBP9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 ZNF557Q8N988 423 aaPredicted RBP9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 MGARPQ8TDB4 240 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 RMDN1Q96DB5 314 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 NDUFAB1O14561 156 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 CST8O60676 142 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 PROSCO94903 275 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 ARIH2O95376 493 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 ACAT1P24752 427 aaKnown RBP9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 FAM187BQ17R55 369 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 EEF1DP3Q658K8 133 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 PPHLN1Q8NEY8 458 aaKnown RBP9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 UHMK1Q8TAS1 419 aaKnown RBP9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 ZNF296Q8WUU4 475 aaPredicted RBP9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 RXFP2Q8WXD0 754 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 SCG3Q8WXD2 468 aaKnown RBP9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 BSNDQ8WZ55 320 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 TBCBQ99426 244 aa9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 CNOT10Q9H9A5 744 aaKnown RBP9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 TRMT13Q9NUP7 481 aaKnown RBP9.71□□□□□ -0.85
FNDC3B-201ENST00000336824 A0A087WUV0 522 aaPredicted RBP9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 CCDC130P13994 396 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 IZUMO3Q5VZ72 239 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 CCDC62Q6P9F0 684 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 EPM2AIP1Q7L775 607 aaPredicted RBP9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 SRRM1Q8IYB3 904 aaKnown RBP9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 MICALL1Q8N3F8 863 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 PABPC5Q96DU9 382 aaKnown RBP9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 PRDM16Q9HAZ2 1276 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 ABCC13Q9NSE7 274 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 ATAD5Q96QE3 1844 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 GEMIN4P57678 1058 aaKnown RBP9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 EFEMP1Q12805 493 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 MIIPQ5JXC2 388 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 C3orf20Q8ND61 904 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 FBF1Q8TES7 1133 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 RPRD1AQ96P16 312 aaPredicted RBP9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 TRIM10Q9UDY6 481 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 CKBP12277 381 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 PRLRP16471 622 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 BDNFP23560 247 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 STIP1P31948 543 aaKnown RBP9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 POLD3Q15054 466 aaPredicted RBP9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 TMED2Q15363 201 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 MEA1Q16626 185 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 MIB1Q86YT6 1006 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 DCLK3Q9C098 648 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 PTCH2Q9Y6C5 1203 aa9.71□□□□□ -0.86
FNDC3B-201ENST00000336824 ACSL3O95573 720 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 TBX2Q13207 712 aaPredicted RBP9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 LINC00523Q86TU6 105 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 TTC30AQ86WT1 665 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 LRRC8CQ8TDW0 803 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 HINFPQ9BQA5 517 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 SPG21Q9NZD8 308 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 FNDC3AQ9Y2H6 1198 aaKnown RBP9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 ANGPTL3Q9Y5C1 460 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 APRTP07741 180 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 CLTBP09497 229 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 FER1L6Q2WGJ9 1857 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 SLC6A3Q01959 620 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 NPAS4Q8IUM7 802 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 SGIP1Q9BQI5 828 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 A0A1B0GUA9 196 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 SLC12A8A0AV02 714 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 ITIH2P19823 946 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 ERMARDQ5T6L9 678 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 ACBD5Q5T8D3 534 aaPredicted RBP9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 PSRC1Q6PGN9 363 aaPredicted RBP9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 PGLYRP2Q96PD5 576 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 FZD8Q9H461 694 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 SLC25A13Q9UJS0 675 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 MYL4P12829 197 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 FNTAP49354 379 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 PDCLQ13371 301 aa9.7□□□□□ -0.86
FNDC3B-201ENST00000336824 RPS6KA2Q15349 733 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms