RNA–Protein interactions for RNA: ENST00000334418.5

CCDC84-201, Transcript of coiled-coil domain containing 84, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC84, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-201ENST00000334418 CPLX3Q8WVH0 158 aa17.12■□□□□ 0.33
CCDC84-201ENST00000334418 SUSD6Q92537 303 aa17.12■□□□□ 0.33
CCDC84-201ENST00000334418 SECISBP2LQ93073 1101 aaKnown RBP17.12■□□□□ 0.33
CCDC84-201ENST00000334418 SLITRK1Q96PX8 696 aa17.12■□□□□ 0.33
CCDC84-201ENST00000334418 LRRC4Q9HBW1 653 aa17.12■□□□□ 0.33
CCDC84-201ENST00000334418 WDR6Q9NNW5 1121 aaKnown RBP17.12■□□□□ 0.33
CCDC84-201ENST00000334418 AVENQ9NQS1 362 aaPredicted RBP17.12■□□□□ 0.33
CCDC84-201ENST00000334418 TMEM30AQ9NV96 361 aa17.12■□□□□ 0.33
CCDC84-201ENST00000334418 HCFC1R1Q9NWW0 138 aa17.12■□□□□ 0.33
CCDC84-201ENST00000334418 MRPS23Q9Y3D9 190 aaKnown RBP17.12■□□□□ 0.33
CCDC84-201ENST00000334418 ZNF638Q14966 1978 aaKnown RBP17.11■□□□□ 0.33
CCDC84-201ENST00000334418 XIRP2A4UGR9 3374 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 BEST1O76090 585 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 FSHRP23945 695 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 CASP14P31944 242 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 SSTR3P32745 418 aaPredicted RBP17.11■□□□□ 0.33
CCDC84-201ENST00000334418 EPHA5P54756 1037 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 SNX16P57768 344 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 CDR2Q01850 454 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 MTMR3Q13615 1198 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 PKDCCQ504Y2 493 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 TAF3Q5VWG9 929 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 DENND1BQ6P3S1 775 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 TRIM72Q6ZMU5 477 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 GET4Q7L5D6 327 aaPredicted RBP17.11■□□□□ 0.33
CCDC84-201ENST00000334418 NOP9Q86U38 636 aaKnown RBP17.11■□□□□ 0.33
CCDC84-201ENST00000334418 TMC8Q8IU68 726 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 GPIHBP1Q8IV16 184 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 PASD1Q8IV76 773 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 CNGA4Q8IV77 575 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 DRC7Q8IY82 874 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 MSANTD4Q8NCY6 345 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 STKLD1Q8NE28 680 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 PDZD8Q8NEN9 1154 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 SYN2Q92777 582 aaPredicted RBP17.11■□□□□ 0.33
CCDC84-201ENST00000334418 FBXO32Q969P5 355 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 MYRFLQ96LU7 910 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 TTLL2Q9BWV7 592 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 LHX5Q9H2C1 402 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 AIPL1Q9NZN9 384 aa17.11■□□□□ 0.33
CCDC84-201ENST00000334418 NOCTQ9UK39 431 aaKnown RBP17.11■□□□□ 0.33
CCDC84-201ENST00000334418 GOLGA6L6A8MZA4 724 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 ADCY5O95622 1261 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 LSM8O95777 96 aaKnown RBP17.1■□□□□ 0.33
CCDC84-201ENST00000334418 HMGA1P17096 107 aaKnown RBP17.1■□□□□ 0.33
CCDC84-201ENST00000334418 YWHAQP27348 245 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 GABRR2P28476 465 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 ACADSBP45954 432 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 NTHL1P78549 312 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 KLHL30Q0D2K2 578 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 ARHGAP15Q53QZ3 475 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 TDRD12Q587J7 1177 aaKnown RBP17.1■□□□□ 0.33
CCDC84-201ENST00000334418 HS6ST3Q8IZP7 471 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 SIX6OS1Q8N1H7 587 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 TMEM35BQ8NCS4 154 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 IPO4Q8TEX9 1081 aaKnown RBP17.1■□□□□ 0.33
CCDC84-201ENST00000334418 KCTD13Q8WZ19 329 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 OVCA2Q8WZ82 227 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 HSFY1Q96LI6 401 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 POMKQ9H5K3 350 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 GRPEL1Q9HAV7 217 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 ZNF334Q9HCZ1 680 aaPredicted RBP17.1■□□□□ 0.33
CCDC84-201ENST00000334418 ST7Q9NRC1 585 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 SEPT11Q9NVA2 429 aaKnown RBP17.1■□□□□ 0.33
CCDC84-201ENST00000334418 ZNHIT6Q9NWK9 470 aaKnown RBP17.1■□□□□ 0.33
CCDC84-201ENST00000334418 CDH22Q9UJ99 828 aa17.1■□□□□ 0.33
CCDC84-201ENST00000334418 DOCK6Q96HP0 2047 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 HHLA1C9JL84 531 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 TNFRSF10BO14763 440 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 MMEP08473 750 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 CDC25BP30305 580 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 PRKCIP41743 596 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 GPD2P43304 727 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 PPP3CCP48454 512 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 TKTL1P51854 596 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 USP46P62068 366 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 PDCLQ13371 301 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 SMAD2Q15796 467 aaKnown RBP17.09■□□□□ 0.33
CCDC84-201ENST00000334418 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.09■□□□□ 0.33
CCDC84-201ENST00000334418 VPS36Q86VN1 386 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 GJD3Q8N144 294 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 C1orf131Q8NDD1 294 aaKnown RBP17.09■□□□□ 0.33
CCDC84-201ENST00000334418 STK32AQ8WU08 396 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 SLC20A1Q8WUM9 679 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 SLC35F5Q8WV83 523 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 DDX1Q92499 740 aaKnown RBP17.09■□□□□ 0.33
CCDC84-201ENST00000334418 MRPS31Q92665 395 aaKnown RBP17.09■□□□□ 0.33
CCDC84-201ENST00000334418 ATXN3LQ9H3M9 355 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 CD320Q9NPF0 282 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 CYLDQ9NQC7 956 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 TRPM5Q9NZQ8 1165 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 ZMYM5Q9UJ78 669 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 BZW2Q9Y6E2 419 aaKnown RBP17.09■□□□□ 0.33
CCDC84-201ENST00000334418 OBSL1O75147 1896 aa17.09■□□□□ 0.33
CCDC84-201ENST00000334418 TCF20Q9UGU0 1960 aaKnown RBP17.09■□□□□ 0.33
CCDC84-201ENST00000334418 NOTCH4Q99466 2003 aa17.08■□□□□ 0.33
CCDC84-201ENST00000334418 NCANO14594 1321 aa17.08■□□□□ 0.32
CCDC84-201ENST00000334418 A0A1W2PRU2 124 aa17.08■□□□□ 0.32
CCDC84-201ENST00000334418 AKR1B15C9JRZ8 316 aaPredicted RBP17.08■□□□□ 0.32
CCDC84-201ENST00000334418 TULP2O00295 520 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms