RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 DGCR6LQ9BY27 220 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 FANCFQ9NPI8 374 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 HMGXB4Q9UGU5 601 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 NOS1P29475 1434 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 ARID1BQ8NFD5 2236 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 DIDO1Q9BTC0 2240 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 RIMBP3CA6NJZ7 1639 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 RIMBP3BA6NNM3 1639 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 RIMBP3Q9UFD9 1639 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 NDUFS8O00217 210 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 PRODHO43272 600 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 NDUFB5O43674 189 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 MNDAP41218 407 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 RABGAP1LQ5R372 815 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 ACAD10Q6JQN1 1059 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 DCDC5Q6ZRR9 648 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 TRMT1LQ7Z2T5 733 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 P4HA3Q7Z4N8 544 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 KAT2AQ92830 837 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 PLEKHG4BQ96PX9 1271 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 TMEM79Q9BSE2 394 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 KRCC1Q9NPI7 259 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 USP21Q9UK80 565 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 PIGBOS1A0A0B4J2F0 54 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 DENND3A2RUS2 1198 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 TXNL1O43396 289 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 RPL13P26373 211 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 ALDH1L2Q3SY69 923 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 TTC33Q6PID6 262 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 SARM1Q6SZW1 724 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 MTHFD1LQ6UB35 978 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 C19orf35Q6ZS72 473 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 NCCRP1Q6ZVX7 275 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 NEDD1Q8NHV4 660 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 ACOT11Q8WXI4 607 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZNF75CPQ92670 426 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 TRIM47Q96LD4 638 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 PITPNM3Q9BZ71 974 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 SEPSECSQ9HD40 501 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 VNN3Q9NY84 501 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 F8W031 263 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 UBXN8O00124 270 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 RPP14O95059 124 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 NADKO95544 446 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 STAG3L2P0CL84 134 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 IL1R1P14778 569 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 PTGS1P23219 599 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 COPAP53621 1224 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 RPS6P62753 249 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 XIAPP98170 497 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 MYL5Q02045 173 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 SSX9Q7RTT3 188 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 PIH1D2Q8WWB5 315 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 TAAR8Q969N4 342 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 STARD13Q9Y3M8 1113 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 SIN3BO75182 1162 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 PGM1P36871 562 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 ATP1A2P50993 1020 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 HTRA4P83105 476 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 MAP4K2Q12851 820 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 PLA2G4EQ3MJ16 856 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 PLD5Q8N7P1 536 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 FAM172AQ8WUF8 416 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 TRIT1Q9H3H1 467 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 GPN1Q9HCN4 374 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 CYP26B1Q9NR63 512 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 ADGRF5Q8IZF2 1346 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 HLA-DRAP01903 254 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 SAGP10523 405 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 GSTT1P30711 240 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 SEPHS1P49903 392 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 DSTNP60981 165 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 PDPK2PQ6A1A2 396 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 TAF2Q6P1X5 1199 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 STOX1Q6ZVD7 989 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 CACUL1Q86Y37 369 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 THNSL1Q8IYQ7 743 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 TGFBRAP1Q8WUH2 860 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 ESYT1Q9BSJ8 1104 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 PRMT8Q9NR22 394 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 CATSPERZQ9NTU4 200 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 ALG1L2C9J202 215 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 BHLHE40O14503 412 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 GNA14O95837 355 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 IFIT1P09914 478 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 TNNI3P19429 210 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 PRKACBP22694 351 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 FAUP35544 74 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 TMPRSS15P98073 1019 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 TRMT5Q32P41 509 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 C8orf59Q8N0T1 100 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 CDC26Q8NHZ8 85 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 Q96MT0 163 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 NLRC4Q9NPP4 1024 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 WDR35Q9P2L0 1181 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 STAP1Q9ULZ2 295 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 INHBAP08476 426 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 KLHL38Q2WGJ6 581 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 TOR1AIP1Q5JTV8 583 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 ANKRD40Q6AI12 368 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms