RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 TRNP1Q6NT89 227 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 C4orf50Q6ZRC1 276 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 FAM183BPQ6ZVS7 135 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 ZNF677Q86XU0 584 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 RAB6CQ9H0N0 254 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 LHX5Q9H2C1 402 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 INSL5Q9Y5Q6 135 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 ADGRG1Q9Y653 693 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 MTCH2Q9Y6C9 303 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 BZW2Q9Y6E2 419 aaKnown RBP17.42■□□□□ 0.38
SHOX-201ENST00000334060 GOLGA8SH3BPF8 625 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 CCL16O15467 120 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 GLUD1P00367 558 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 ADH1AP07327 375 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 C8AP07357 584 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 USP17L7P0C7H9 530 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 PLA2G4AP47712 749 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 NFE2Q16621 373 aaPredicted RBP17.41■□□□□ 0.38
SHOX-201ENST00000334060 HABP4Q5JVS0 413 aaKnown RBP17.41■□□□□ 0.38
SHOX-201ENST00000334060 DAB2IPQ5VWQ8 1189 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 ACAD10Q6JQN1 1059 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 MCOLN2Q8IZK6 566 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 HS6ST3Q8IZP7 471 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 MYLIPQ8WY64 445 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 BTBD6Q96KE9 485 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 PPP1R13BQ96KQ4 1090 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 EMILIN2Q9BXX0 1053 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 ADAM33Q9BZ11 813 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 ULBP1Q9BZM6 244 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 TLE6Q9H808 572 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 ZNF334Q9HCZ1 680 aaPredicted RBP17.41■□□□□ 0.38
SHOX-201ENST00000334060 DMAP1Q9NPF5 467 aaPredicted RBP17.41■□□□□ 0.38
SHOX-201ENST00000334060 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.41■□□□□ 0.38
SHOX-201ENST00000334060 MYO1AQ9UBC5 1043 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 MAGED2Q9UNF1 606 aaPredicted RBP17.41■□□□□ 0.38
SHOX-201ENST00000334060 BRWD1Q9NSI6 2320 aa17.41■□□□□ 0.38
SHOX-201ENST00000334060 PRRG1O14668 218 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 XPO1O14980 1071 aaKnown RBP17.4■□□□□ 0.38
SHOX-201ENST00000334060 CCDC172P0C7W6 258 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 MMP8P22894 467 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 TKTL1P51854 596 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 NTHL1P78549 312 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 KCNC3Q14003 757 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 DUSP6Q16828 381 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 POTEHQ6S545 545 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 XYLT1Q86Y38 959 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 TMEM35BQ8NCS4 154 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 SPPL2BQ8TCT7 592 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 KHSRPQ92945 711 aaKnown RBP eCLIP17.4■□□□□ 0.38
SHOX-201ENST00000334060 SLC4A5Q9BY07 1137 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 ISCUQ9H1K1 167 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 OSGEPQ9NPF4 335 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 OSER1Q9NX31 292 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 TRMT1Q9NXH9 659 aaKnown RBP17.4■□□□□ 0.38
SHOX-201ENST00000334060 NUDT5Q9UKK9 219 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 COG5Q9UP83 839 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 PCDHA13Q9Y5I0 950 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 GREB1Q4ZG55 1949 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 EIF3CLB5ME19 914 aaKnown RBP17.4■□□□□ 0.38
SHOX-201ENST00000334060 LCA5LO95447 670 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 GJA1P17302 382 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 PITX1P78337 314 aaPredicted RBP17.4■□□□□ 0.38
SHOX-201ENST00000334060 MAPRE1Q15691 268 aaKnown RBP17.4■□□□□ 0.38
SHOX-201ENST00000334060 PTPROQ16827 1216 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 EMC1Q8N766 993 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 JOSD2Q8TAC2 188 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 FUBP3Q96I24 572 aaKnown RBP eCLIP17.4■□□□□ 0.38
SHOX-201ENST00000334060 GUCD1Q96NT3 240 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 EIF3CQ99613 913 aaKnown RBP17.4■□□□□ 0.38
SHOX-201ENST00000334060 GOLPH3Q9H4A6 298 aa17.4■□□□□ 0.38
SHOX-201ENST00000334060 TCRBV5S1A1TA0A578 114 aa17.39■□□□□ 0.37
SHOX-201ENST00000334060 ARHGAP6O43182 974 aa17.39■□□□□ 0.37
SHOX-201ENST00000334060 HMGA1P17096 107 aaKnown RBP17.39■□□□□ 0.37
SHOX-201ENST00000334060 TFE3P19532 575 aaPredicted RBP17.39■□□□□ 0.37
SHOX-201ENST00000334060 NSFP46459 744 aaKnown RBP17.39■□□□□ 0.37
SHOX-201ENST00000334060 RAB41Q5JT25 222 aa17.39■□□□□ 0.37
SHOX-201ENST00000334060 ERICH1Q86X53 443 aa17.39■□□□□ 0.37
SHOX-201ENST00000334060 TCEAL8Q8IYN2 117 aa17.39■□□□□ 0.37
SHOX-201ENST00000334060 ST13P5Q8NFI4 369 aaPredicted RBP17.39■□□□□ 0.37
SHOX-201ENST00000334060 IRX2Q9BZI1 471 aaPredicted RBP17.39■□□□□ 0.37
SHOX-201ENST00000334060 NMUR1Q9HB89 426 aa17.39■□□□□ 0.37
SHOX-201ENST00000334060 ADAM22Q9P0K1 906 aa17.39■□□□□ 0.37
SHOX-201ENST00000334060 CARNS1A5YM72 827 aa17.39■□□□□ 0.37
SHOX-201ENST00000334060 YJEFN3A6XGL0 299 aa17.39■□□□□ 0.37
SHOX-201ENST00000334060 E7ENQ6 273 aa17.39■□□□□ 0.37
SHOX-201ENST00000334060 TADA3O75528 432 aa17.39■□□□□ 0.37
SHOX-201ENST00000334060 SETSIPP0DME0 302 aa17.39■□□□□ 0.37
SHOX-201ENST00000334060 RPL7AP62424 266 aaKnown RBP17.39■□□□□ 0.37
SHOX-201ENST00000334060 CCDC85BQ15834 202 aaPredicted RBP17.39■□□□□ 0.37
SHOX-201ENST00000334060 TPGS2Q68CL5 300 aa17.39■□□□□ 0.37
SHOX-201ENST00000334060 OLFML1Q6UWY5 402 aa17.39■□□□□ 0.37
SHOX-201ENST00000334060 PHF13Q86YI8 300 aaPredicted RBP17.39■□□□□ 0.37
SHOX-201ENST00000334060 ZNF653Q96CK0 615 aa17.39■□□□□ 0.37
SHOX-201ENST00000334060 MYO16Q9Y6X6 1858 aa17.38■□□□□ 0.37
SHOX-201ENST00000334060 SLC38A8A6NNN8 435 aa17.38■□□□□ 0.37
SHOX-201ENST00000334060 RTN2O75298 545 aa17.38■□□□□ 0.37
SHOX-201ENST00000334060 LSM8O95777 96 aaKnown RBP17.38■□□□□ 0.37
SHOX-201ENST00000334060 CCR2P41597 374 aa17.38■□□□□ 0.37
SHOX-201ENST00000334060 ARHGAP25P42331 645 aa17.38■□□□□ 0.37
SHOX-201ENST00000334060 MAGEA1P43355 309 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms