RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 EGFRP00533 1210 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 ALBP02768 609 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 PDHBP11177 359 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 ITGAXP20702 1163 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 SPRP35270 261 aaPredicted RBP10.93□□□□□ -0.66
CLN8-201ENST00000331222 SCNN1BP51168 640 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 EPHB3P54753 998 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 ARF5P84085 180 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 VAC14Q08AM6 782 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 PTK6Q13882 451 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 TAF5Q15542 800 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 DGKKQ5KSL6 1271 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 C9orf131Q5VYM1 1079 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 CLYBLQ8N0X4 340 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 ATG4AQ8WYN0 398 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 OSBPL6Q9BZF3 934 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 PAIP2BQ9ULR5 123 aaKnown RBP10.93□□□□□ -0.66
CLN8-201ENST00000331222 GRID2IPA4D2P6 1211 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 VPS26AO75436 327 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 SLC1A1P43005 524 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 ATP2C1P98194 919 aaPredicted RBP10.93□□□□□ -0.66
CLN8-201ENST00000331222 ZNF543Q08ER8 600 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 SGCGQ13326 291 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 ZNF284Q2VY69 593 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 C12orf60Q5U649 245 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 COL26A1Q96A83 441 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 CELF6Q96J87 481 aaKnown RBP10.93□□□□□ -0.66
CLN8-201ENST00000331222 TUT1Q9H6E5 874 aaKnown RBP10.93□□□□□ -0.66
CLN8-201ENST00000331222 IPPQ9Y573 584 aa10.93□□□□□ -0.66
CLN8-201ENST00000331222 TRIM43BA6NCK2 446 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 B2RBV5 119 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 CCNT2O60583 730 aaKnown RBP10.92□□□□□ -0.66
CLN8-201ENST00000331222 SGPL1O95470 568 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 MAGEA4P43358 317 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 TAF6P49848 677 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 TRIP10Q15642 601 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 ISLR2Q6UXK2 745 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 ZNF579Q8NAF0 562 aaKnown RBP10.92□□□□□ -0.66
CLN8-201ENST00000331222 VPS37AQ8NEZ2 397 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 USP20Q9Y2K6 914 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 PCDHB12Q9Y5F1 795 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 PFASO15067 1338 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 EIF2S1P05198 315 aaKnown RBP10.92□□□□□ -0.66
CLN8-201ENST00000331222 UCHL3P15374 230 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 KCNA3P22001 575 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 GARTP22102 1010 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 TRAF2Q12933 501 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 STAT4Q14765 748 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 CNGA2Q16280 664 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 STRIP1Q5VSL9 837 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 OPTNQ96CV9 577 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 OSMRQ99650 979 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 OSBPL8Q9BZF1 889 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 KRCC1Q9NPI7 259 aaPredicted RBP10.92□□□□□ -0.66
CLN8-201ENST00000331222 KCNH7Q9NS40 1196 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 KLC4Q9NSK0 619 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 PVALEFA0A1B0GWK0 134 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 RAG1P15918 1043 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 LPIN1Q14693 890 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 SNAP47Q5SQN1 464 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 TTC39CQ8N584 583 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 SCFD2Q8WU76 684 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 USP6NLQ92738 828 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 ERP27Q96DN0 273 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 SH3GL3Q99963 347 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 GRIN3BO60391 1043 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 BOP1Q14137 746 aaKnown RBP10.92□□□□□ -0.66
CLN8-201ENST00000331222 PDIA6Q15084 440 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 CCDC149Q6ZUS6 474 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 MARK2Q7KZI7 788 aaKnown RBP10.92□□□□□ -0.66
CLN8-201ENST00000331222 PALB2Q86YC2 1186 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 LEMD2Q8NC56 503 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 FEZF2Q8TBJ5 459 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 SNRNP27Q8WVK2 155 aaKnown RBP10.92□□□□□ -0.66
CLN8-201ENST00000331222 FAM111AQ96PZ2 611 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 BTBD9Q96Q07 612 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 MANSC1Q9H8J5 431 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 EIF3LQ9Y262 564 aaKnown RBP10.92□□□□□ -0.66
CLN8-201ENST00000331222 STK36Q9NRP7 1315 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 GPR182O15218 404 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 ZNF23P17027 643 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 RRM2P31350 389 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 FAM83EQ2M2I3 478 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 DNAJB3Q8WWF6 145 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 RELTQ969Z4 430 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 MXRA8Q9BRK3 442 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 SNTG2Q9NY99 539 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 LNPEPQ9UIQ6 1025 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 LAMC1P11047 1609 aa10.92□□□□□ -0.66
CLN8-201ENST00000331222 PIPSLA2A3N6 862 aa10.91□□□□□ -0.66
CLN8-201ENST00000331222 DEAF1O75398 565 aaPredicted RBP10.91□□□□□ -0.66
CLN8-201ENST00000331222 DNAJC3Q13217 504 aa10.91□□□□□ -0.66
CLN8-201ENST00000331222 POU6F1Q14863 301 aa10.91□□□□□ -0.66
CLN8-201ENST00000331222 MB21D2Q8IYB1 491 aaPredicted RBP10.91□□□□□ -0.66
CLN8-201ENST00000331222 ZNF333Q96JL9 665 aa10.91□□□□□ -0.66
CLN8-201ENST00000331222 FICDQ9BVA6 458 aa10.91□□□□□ -0.66
CLN8-201ENST00000331222 RPS6KL1Q9Y6S9 549 aa10.91□□□□□ -0.66
CLN8-201ENST00000331222 NEO1Q92859 1461 aa10.91□□□□□ -0.66
CLN8-201ENST00000331222 MAGEB2O15479 319 aa10.91□□□□□ -0.66
CLN8-201ENST00000331222 RAD51CO43502 376 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms