RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 S100A14Q9HCY8 104 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 C19orf81C9J6K1 198 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 HNRNPRO43390 633 aaKnown RBP18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 ITGAVP06756 1048 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 UQCRBP14927 111 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 UBXN2AP68543 259 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 GCNT1Q02742 428 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 PRPF39Q86UA1 669 aaKnown RBP18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 NKD2Q969F2 451 aaPredicted RBP18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 PLEKHG4BQ96PX9 1271 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 EPB41L1Q9H4G0 881 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 SLC38A10Q9HBR0 1119 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 MRPL47Q9HD33 250 aaKnown RBP18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 HSFX1Q9UBD0 423 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 PCDHB2Q9Y5E7 798 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 GMEB1Q9Y692 573 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 SNCAIPQ9Y6H5 919 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 TLR3O15455 904 aaKnown RBP18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 TMCC1O94876 653 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 OR6B1O95007 311 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 STIP1P31948 543 aaKnown RBP18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 DSG3P32926 999 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 SNRPFP62306 86 aaKnown RBP18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 SLC18A2Q05940 514 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 TTLL12Q14166 644 aaPredicted RBP18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 ENOSF1Q7L5Y1 443 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 PCGF5Q86SE9 256 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 PPIL6Q8IXY8 311 aa18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 NMD3Q96D46 503 aaKnown RBP18.89■□□□□ 0.61
CLSTN3-202ENST00000331148 IQANK1A0A1B0GTG1 560 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 ARP10275 920 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 PTK7Q13308 1070 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 GPR162Q16538 588 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 LRRC36Q1X8D7 754 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 PLEKHA7Q6IQ23 1121 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 B3GNT9Q6UX72 402 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 SPOCD1Q6ZMY3 1216 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 CPXCR1Q8N123 301 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 GSTCDQ8NEC7 633 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 CPT1BQ92523 772 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 TEKT3Q9BXF9 490 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 WWP1Q9H0M0 922 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 CLIC5Q9NZA1 410 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 ADM5C9JUS6 153 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 SLC16A4O15374 487 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 HMGCS2P54868 508 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 AQP4P55087 323 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 SH2D4BQ5SQS7 431 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 DLK2Q6UY11 383 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 SH2D5Q6ZV89 423 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 SV2AQ7L0J3 742 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 PASD1Q8IV76 773 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 PALM2Q8IXS6 379 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 SHKBP1Q8TBC3 707 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 MIPOL1Q8TD10 442 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 PYDC1Q8WXC3 89 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 C12orf42Q96LP6 360 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 C7orf26Q96N11 449 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 CCDC106Q9BWC9 280 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 PTTG2Q9NZH5 202 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 NDUFA13Q9P0J0 144 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 SCINQ9Y6U3 715 aa18.88■□□□□ 0.61
CLSTN3-202ENST00000331148 SRCAPQ6ZRS2 3230 aa18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 E7ESA3 106 aa18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 I3L4J1 428 aa18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 IPO5O00410 1097 aaKnown RBP18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 CFHP08603 1231 aa18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 PDE1BQ01064 536 aa18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 PLCB3Q01970 1234 aa18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 MTM1Q13496 603 aa18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 CEP55Q53EZ4 464 aa18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 LPCAT4Q643R3 524 aa18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 RNF111Q6ZNA4 994 aa18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 USP50Q70EL3 339 aaPredicted RBP18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 NAT8LQ8N9F0 302 aa18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 KLHL4Q9C0H6 718 aa18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 C1orf21Q9H246 121 aa18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 ST6GALNAC4Q9H4F1 302 aa18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 C17orf75Q9HAS0 396 aa18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 PPME1Q9Y570 386 aa18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 CTDP1Q9Y5B0 961 aaPredicted RBP18.87■□□□□ 0.61
CLSTN3-202ENST00000331148 hCG_1818297A0A087WSY0 165 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 A0A088AWK7 358 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 MEI4A8MW99 385 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 VCLP18206 1134 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 RGS2P41220 211 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 DEUP1Q05D60 604 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 FAAP100Q0VG06 881 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 DLG1Q12959 904 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 ITGA9Q13797 1035 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 TBCCQ15814 346 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 BBS9Q3SYG4 887 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 EFHC1Q5JVL4 640 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 ARID3BQ8IVW6 561 aaPredicted RBP18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 TMC2Q8TDI7 906 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 EHMT1Q9H9B1 1298 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 RAVER2Q9HCJ3 691 aaKnown RBP18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 C1orf112Q9NSG2 853 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 CIDEBQ9UHD4 219 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms