RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 FOXN2P32314 431 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 DPYSL3Q14195 570 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 NOMO1Q15155 1222 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 STILQ15468 1287 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 ZKSCAN8Q15776 578 aaPredicted RBP15.23■□□□□ 0.03
TPM3-206ENST00000330188 DCAF4L1Q3SXM0 396 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 PPP1R26Q5T8A7 1209 aaPredicted RBP15.23■□□□□ 0.03
TPM3-206ENST00000330188 CGB2Q6NT52 195 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 NPNTQ6UXI9 565 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 SUGP1Q8IWZ8 645 aaKnown RBP15.23■□□□□ 0.03
TPM3-206ENST00000330188 SPATA18Q8TC71 538 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 DENND1AQ8TEH3 1009 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 MRPL45Q9BRJ2 306 aaKnown RBP15.23■□□□□ 0.03
TPM3-206ENST00000330188 TRABDQ9H4I3 376 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 SPON1Q9HCB6 807 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 HAUS2Q9NVX0 235 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 PSMC3IPQ9P2W1 217 aaPredicted RBP15.23■□□□□ 0.03
TPM3-206ENST00000330188 RABGEF1Q9UJ41 708 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 PPEF2O14830 753 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 GRAP2O75791 330 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 ASMTLO95671 621 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 RDXP35241 583 aaKnown RBP15.23■□□□□ 0.03
TPM3-206ENST00000330188 RGS7P49802 495 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 IL9RQ01113 521 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 XRCC4Q13426 336 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 CDO1Q16878 200 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 KIZQ2M2Z5 673 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 DUSP28Q4G0W2 176 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 PKDCCQ504Y2 493 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 SPATA21Q7Z572 469 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 TAB3Q8N5C8 712 aaPredicted RBP15.23■□□□□ 0.03
TPM3-206ENST00000330188 PYROXD1Q8WU10 500 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 MS4A4AQ96JQ5 239 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 ZMAT2Q96NC0 199 aaKnown RBP15.23■□□□□ 0.03
TPM3-206ENST00000330188 MAK16Q9BXY0 300 aaKnown RBP15.23■□□□□ 0.03
TPM3-206ENST00000330188 SENP1Q9P0U3 644 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 MORF4L1Q9UBU8 362 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 NME7Q9Y5B8 376 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 SMAPO00193 183 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 DPYSL4O14531 572 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 SUN1O94901 812 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 KRT15P19012 456 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 SSTR1P30872 391 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 HOXA11P31270 313 aaPredicted RBP15.22■□□□□ 0.03
TPM3-206ENST00000330188 SLC18A1P54219 525 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 NRLP54845 237 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 GEMIN4P57678 1058 aaKnown RBP15.22■□□□□ 0.03
TPM3-206ENST00000330188 ROR1Q01973 937 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 CCDC14Q49A88 953 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 PMF1Q6P1K2 205 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 OLFML1Q6UWY5 402 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 TTC30AQ86WT1 665 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 ATP11CQ8NB49 1132 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 OR6J1Q8NGC5 347 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 ADAMTS10Q9H324 1103 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 PLEKHA5Q9HAU0 1116 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 KLC4Q9NSK0 619 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 SNTG2Q9NY99 539 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 PRKAG3Q9UGI9 489 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 FETUBQ9UGM5 382 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 SLC45A1Q9Y2W3 748 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 DERAQ9Y315 318 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 PRPSAP2O60256 369 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 PHBP35232 272 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 BASP1P80723 227 aaKnown RBP15.22■□□□□ 0.03
TPM3-206ENST00000330188 TFDP2Q14188 446 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 EFTUD2Q15029 972 aaKnown RBP eCLIP15.22■□□□□ 0.032e-18■■■■□ 20.8
TPM3-206ENST00000330188 FAM47CQ5HY64 1035 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 DARS2Q6PI48 645 aaKnown RBP15.22■□□□□ 0.03
TPM3-206ENST00000330188 ACOT1Q86TX2 421 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 FUKQ8N0W3 1084 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 C4orf33Q8N1A6 199 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 FBXO36Q8NEA4 188 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 MRRFQ96E11 262 aaKnown RBP15.22■□□□□ 0.03
TPM3-206ENST00000330188 MAML3Q96JK9 1138 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 SNX27Q96L92 541 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 SMC6Q96SB8 1091 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 XPO7Q9UIA9 1087 aaKnown RBP15.22■□□□□ 0.03
TPM3-206ENST00000330188 SMG5Q9UPR3 1016 aaKnown RBP15.22■□□□□ 0.03
TPM3-206ENST00000330188 ARL2BPQ9Y2Y0 163 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 SNX9Q9Y5X1 595 aa15.22■□□□□ 0.03
TPM3-206ENST00000330188 PDCD11Q14690 1871 aaKnown RBP15.21■□□□□ 0.03
TPM3-206ENST00000330188 CCL15-CCL14A0A0B4J2E2 113 aa15.21■□□□□ 0.03
TPM3-206ENST00000330188 A0A1W2PPM1 405 aa15.21■□□□□ 0.03
TPM3-206ENST00000330188 STIP1P31948 543 aaKnown RBP15.21■□□□□ 0.03
TPM3-206ENST00000330188 ATP11AP98196 1134 aa15.21■□□□□ 0.03
TPM3-206ENST00000330188 GRB14Q14449 540 aa15.21■□□□□ 0.03
TPM3-206ENST00000330188 MTFR1Q15390 333 aa15.21■□□□□ 0.03
TPM3-206ENST00000330188 CCL15Q16663 113 aa15.21■□□□□ 0.03
TPM3-206ENST00000330188 DGKDQ16760 1214 aa15.21■□□□□ 0.03
TPM3-206ENST00000330188 GPR142Q7Z601 462 aa15.21■□□□□ 0.03
TPM3-206ENST00000330188 DPP9Q86TI2 863 aa15.21■□□□□ 0.03
TPM3-206ENST00000330188 ZC3H18Q86VM9 953 aaKnown RBP15.21■□□□□ 0.03
TPM3-206ENST00000330188 KHSRPQ92945 711 aaKnown RBP eCLIP15.21■□□□□ 0.03
TPM3-206ENST00000330188 RNF157Q96PX1 679 aa15.21■□□□□ 0.03
TPM3-206ENST00000330188 SLC4A5Q9BY07 1137 aa15.21■□□□□ 0.03
TPM3-206ENST00000330188 EIF2AQ9BY44 585 aaKnown RBP15.21■□□□□ 0.03
TPM3-206ENST00000330188 SETD4Q9NVD3 440 aa15.21■□□□□ 0.03
TPM3-206ENST00000330188 TUBGCP4Q9UGJ1 667 aa15.21■□□□□ 0.03
TPM3-206ENST00000330188 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms