RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 SHCBP1LQ9BZQ2 653 aa16.71■□□□□ 0.27
SYNM-201ENST00000328642 ATXN3LQ9H3M9 355 aa16.71■□□□□ 0.27
SYNM-201ENST00000328642 AP4E1Q9UPM8 1137 aa16.71■□□□□ 0.27
SYNM-201ENST00000328642 NAALADL1Q9UQQ1 740 aa16.71■□□□□ 0.27
SYNM-201ENST00000328642 CITO14578 2027 aa16.71■□□□□ 0.26
SYNM-201ENST00000328642 PMPCBO75439 489 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 STAT4Q14765 748 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 CCNG2Q16589 344 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 DEFB106AQ8N104 65 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 SLC25A41Q8N5S1 370 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 SKA2Q8WVK7 121 aaPredicted RBP16.7■□□□□ 0.26
SYNM-201ENST00000328642 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.7■□□□□ 0.26
SYNM-201ENST00000328642 ZFATQ9P243 1243 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 ENDOD1O94919 500 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 CYP1A2P05177 515 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 SMPD1P17405 629 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 PTK7Q13308 1070 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 SV2CQ496J9 727 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 SDHAF4Q5VUM1 108 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 LVRNQ6Q4G3 990 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 KCNV2Q8TDN2 545 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 ETNK1Q9HBU6 452 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 TNFSF13BQ9Y275 285 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 MROH7Q68CQ1 1323 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 CEP290O15078 2479 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 H3BRJ5 948 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 TTC4O95801 387 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 THOC5Q13769 683 aaKnown RBP16.7■□□□□ 0.26
SYNM-201ENST00000328642 EML3Q32P44 896 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 MICAL1Q8TDZ2 1067 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 BRI3BPQ8WY22 251 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 CYTH2Q99418 400 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 KATNAL1Q9BW62 490 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 ZBBXA8MT70 800 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 YBX3P16989 372 aaKnown RBP eCLIP16.7■□□□□ 0.26
SYNM-201ENST00000328642 TPH1P17752 444 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 RBL1P28749 1068 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 GLB1LQ6UWU2 654 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 LRIG3Q6UXM1 1119 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 HAUS2Q9NVX0 235 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 BFARQ9NZS9 450 aa16.7■□□□□ 0.26
SYNM-201ENST00000328642 AVILO75366 819 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 ZNF662Q6ZS27 426 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 FAM183BPQ6ZVS7 135 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 IPMKQ8NFU5 416 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 FAM111AQ96PZ2 611 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 TRIM49D1C9J1S8 452 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 USP17L7P0C7H9 530 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 CPA2P48052 419 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 BOLA3Q53S33 107 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 C12orf56Q8IXR9 622 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 SGF29Q96ES7 293 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 ASB7Q9H672 318 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 KIF9Q9HAQ2 790 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 ADAMTS7Q9UKP4 1686 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 AGPSO00116 658 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 TXNDC9O14530 226 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 CFLARO15519 480 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 MEFVO15553 781 aaPredicted RBP16.69■□□□□ 0.26
SYNM-201ENST00000328642 BDNFP23560 247 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 ATXN1P54253 815 aaKnown RBP16.69■□□□□ 0.26
SYNM-201ENST00000328642 CENPCQ03188 943 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 SLC12A1Q13621 1099 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 DCAF12L1Q5VU92 463 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 DEFB128Q7Z7B8 93 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 NUDCD3Q8IVD9 361 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 TTC25Q96NG3 672 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 FAM8A1Q9UBU6 413 aa16.69■□□□□ 0.26
SYNM-201ENST00000328642 TNRC6CQ9HCJ0 1690 aaKnown RBP16.68■□□□□ 0.26
SYNM-201ENST00000328642 RPTORQ8N122 1335 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 PPEF2O14830 753 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 KRT38O76015 456 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 ELK3P41970 407 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 TAS1R3Q7RTX0 852 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 PLPPR4Q7Z2D5 763 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 CDKL3Q8IVW4 592 aaPredicted RBP16.68■□□□□ 0.26
SYNM-201ENST00000328642 C3orf20Q8ND61 904 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 TWNKQ96RR1 684 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 ELOVL4Q9GZR5 314 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 NINJ2Q9NZG7 142 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 A0A0G2JLL6 359 aaPredicted RBP16.68■□□□□ 0.26
SYNM-201ENST00000328642 PABPN1LA6NDY0 278 aaKnown RBP16.68■□□□□ 0.26
SYNM-201ENST00000328642 ATXN8OSP0DMR3 200 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 VCPP55072 806 aaKnown RBP16.68■□□□□ 0.26
SYNM-201ENST00000328642 TSTA3Q13630 321 aaPredicted RBP16.68■□□□□ 0.26
SYNM-201ENST00000328642 DCAF4L1Q3SXM0 396 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 PRRT2Q7Z6L0 340 aaPredicted RBP16.68■□□□□ 0.26
SYNM-201ENST00000328642 GPR152Q8TDT2 470 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 PCYT2Q99447 389 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 NTPCRQ9BSD7 190 aaKnown RBP16.68■□□□□ 0.26
SYNM-201ENST00000328642 SPTLC1O15269 473 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 MSCO60682 206 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 IRF1P10914 325 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 PKN2Q16513 984 aaKnown RBP16.68■□□□□ 0.26
SYNM-201ENST00000328642 PPIL6Q8IXY8 311 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 NDUFAF2Q8N183 169 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 SMC1BQ8NDV3 1235 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 ADAM2Q99965 735 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 C12orf65Q9H3J6 166 aaKnown RBP16.68■□□□□ 0.26
SYNM-201ENST00000328642 SARS2Q9NP81 518 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms