RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 DCP1BQ8IZD4 617 aaKnown RBP19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 NKX2-4Q9H2Z4 354 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 KRT82Q9NSB4 513 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 ADAM22Q9P0K1 906 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 TMEM59LQ9UK28 342 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 BACE2Q9Y5Z0 518 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 CDY1Q9Y6F8 540 aa19.76■□□□□ 0.75
EXOSC3-201ENST00000327304 C5orf67F2Z3F1 127 aa19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 PGRMC1O00264 195 aaKnown RBP19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 CEP104O60308 925 aa19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 CACNA2D1P54289 1103 aa19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 BCAT1P54687 386 aa19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 PDE4CQ08493 712 aa19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 MESDQ14696 234 aa19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 MAPRE1Q15691 268 aaKnown RBP19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 C2CD6Q53TS8 623 aa19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 CHRDL2Q6WN34 429 aa19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 UBL4BQ8N7F7 174 aa19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 FBXO22Q8NEZ5 403 aa19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 TGS1Q96RS0 853 aaKnown RBP19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 CLSTN3Q9BQT9 956 aa19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 MRPL47Q9HD33 250 aaKnown RBP19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 RBM12Q9NTZ6 932 aaKnown RBP19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 TMEM30AQ9NV96 361 aa19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 SMARCAL1Q9NZC9 954 aa19.75■□□□□ 0.75
EXOSC3-201ENST00000327304 LAMA3Q16787 3333 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 ERLIN1O75477 346 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 CPB1P15086 417 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 COMTP21964 271 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 RRM1P23921 792 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 DNAJB1P25685 340 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 ERVK-21P61565 698 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 BST2Q10589 180 aaKnown RBP19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 PTP4A2Q12974 167 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 CC2D1AQ6P1N0 951 aaPredicted RBP19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 SPPL3Q8TCT6 385 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 PGLYRP2Q96PD5 576 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 DUSP16Q9BY84 665 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 OXCT2Q9BYC2 517 aaPredicted RBP19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 PRO3102Q9H379 93 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 ARFGAP3Q9NP61 516 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 STK39Q9UEW8 545 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 SCINQ9Y6U3 715 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 ATP8B1O43520 1251 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 LILRB3O75022 631 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 AP1G2O75843 785 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 BEST1O76090 585 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 FAM200BP0CF97 657 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 CTSAP10619 480 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 NPR3P17342 541 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 MMP8P22894 467 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 BDNFP23560 247 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 OR1D2P34982 312 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 VSNL1P62760 191 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 PDCLQ13371 301 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 RAB30Q15771 203 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 PTPROQ16827 1216 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 PTPN20Q4JDL3 420 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 PLEKHA7Q6IQ23 1121 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 SLC8B1Q6J4K2 584 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 MMS22LQ6ZRQ5 1243 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 SPATA2LQ8IUW3 424 aaPredicted RBP19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 SLC35F5Q8WV83 523 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 CD101Q93033 1021 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 SMOQ99835 787 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 C11orf70Q9BRQ4 267 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 MRPL17Q9NRX2 175 aaKnown RBP19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 ABI2Q9NYB9 513 aaPredicted RBP19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 TJP2Q9UDY2 1190 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 CHORDC1Q9UHD1 332 aaPredicted RBP19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 MSRAQ9UJ68 235 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 LZTS1Q9Y250 596 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 PTPRDP23468 1912 aa19.74■□□□□ 0.75
EXOSC3-201ENST00000327304 CCDC66A2RUB6 948 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 CSPG5O95196 566 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 ZRANB2O95218 330 aaKnown RBP eCLIP19.73■□□□□ 0.751e-7■□□□□ 10.3
EXOSC3-201ENST00000327304 VNN2O95498 520 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 RB1P06400 928 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 CTNNA2P26232 953 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 RGS7P49802 495 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 ERVFC1P60507 584 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 ROR1Q01973 937 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 GPR17Q13304 367 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 NFE2Q16621 373 aaPredicted RBP19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 PMF1Q6P1K2 205 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 RNF19BQ6ZMZ0 732 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 C4orf50Q6ZRC1 276 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 CLEC20AQ6ZU45 233 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 SMARCD1Q96GM5 515 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 CPXM1Q96SM3 734 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 NAP1L3Q99457 506 aaPredicted RBP19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 C11orf84Q9BUA3 381 aaPredicted RBP19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 CERS4Q9HA82 394 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 ZNF446Q9NWS9 450 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 ANAPC7Q9UJX3 599 aa19.73■□□□□ 0.75
EXOSC3-201ENST00000327304 WDR27A2RRH5 827 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 CCDC188H7C350 402 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 GRM6O15303 877 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 CALB1P05937 261 aa19.72■□□□□ 0.75
EXOSC3-201ENST00000327304 SETSIPP0DME0 302 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms