RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 MAP3K13O43283 966 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 MAGEC1O60732 1142 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 RNF8O76064 485 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 GCLCP48506 637 aaPredicted RBP15.24■□□□□ 0.03
SSBP3-201ENST00000326956 SLC18A2Q05940 514 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 GSTA3Q16772 222 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 XKR3Q5GH77 459 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 PPP1R15BQ5SWA1 713 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 C1orf146Q5VVC0 180 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 SLC26A11Q86WA9 606 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 CRLF3Q8IUI8 442 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 E2F7Q96AV8 911 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 WDR83Q9BRX9 315 aaKnown RBP15.24■□□□□ 0.03
SSBP3-201ENST00000326956 SLC13A1Q9BZW2 595 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 ETAA1Q9NY74 926 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 POLIQ9UNA4 740 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 CCDC195A0A1B0GUA6 201 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 F8W8V4 182 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 MAFGO15525 162 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 SNRPAP09012 282 aaKnown RBP15.24■□□□□ 0.03
SSBP3-201ENST00000326956 EIF4BP23588 611 aaKnown RBP15.24■□□□□ 0.03
SSBP3-201ENST00000326956 RAP1GDS1P52306 607 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 PSMC1P62191 440 aaKnown RBP15.24■□□□□ 0.03
SSBP3-201ENST00000326956 ROR1Q01973 937 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 DNAL1Q4LDG9 190 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 IZUMO2Q6UXV1 221 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 NUDCD3Q8IVD9 361 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 CCDC60Q8IWA6 550 aaPredicted RBP15.24■□□□□ 0.03
SSBP3-201ENST00000326956 PPP1R14CQ8TAE6 165 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 LPAR1Q92633 364 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 STYXL1Q9Y6J8 313 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 ANKRD31Q8N7Z5 1873 aa15.24■□□□□ 0.03
SSBP3-201ENST00000326956 H7C0C1 242 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 LRCH4O75427 683 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 ZCCHC18P0CG32 403 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 ATP5OP48047 213 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 ZNF132P52740 706 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 DSG1Q02413 1049 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 GHRHRQ02643 423 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 NBPF20Q3BBV1 942 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 NET1Q7Z628 596 aaPredicted RBP15.23■□□□□ 0.03
SSBP3-201ENST00000326956 PRPF39Q86UA1 669 aaKnown RBP15.23■□□□□ 0.03
SSBP3-201ENST00000326956 IGDCC3Q8IVU1 814 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 RBM15BQ8NDT2 890 aaKnown RBP15.23■□□□□ 0.03
SSBP3-201ENST00000326956 NIF3L1Q9GZT8 377 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 PDLIM7Q9NR12 457 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 MARCOQ9UEW3 520 aaPredicted RBP15.23■□□□□ 0.03
SSBP3-201ENST00000326956 TAGLN3Q9UI15 199 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 KAT6AQ92794 2004 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 APOC4-APOC2K7ER74 178 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 CST3P01034 146 aaPredicted RBP15.23■□□□□ 0.03
SSBP3-201ENST00000326956 APOC2P02655 101 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 ANPEPP15144 967 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 RAB27AP51159 221 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 ALDH18A1P54886 795 aaKnown RBP15.23■□□□□ 0.03
SSBP3-201ENST00000326956 BST1Q10588 318 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 CHI3L2Q15782 390 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 XRRA1Q6P2D8 792 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 RIPOR1Q6ZS17 1223 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.23■□□□□ 0.03
SSBP3-201ENST00000326956 ZFAND2BQ8WV99 257 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 MTBPQ96DY7 904 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 NR1H4Q96RI1 486 aaPredicted RBP15.23■□□□□ 0.03
SSBP3-201ENST00000326956 TCRBV5S1A1TA0A578 114 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 C3orf70A6NLC5 250 aaPredicted RBP15.23■□□□□ 0.03
SSBP3-201ENST00000326956 KLF11O14901 512 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 TBC1D12O60347 775 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 ASS1P00966 412 aaKnown RBP15.23■□□□□ 0.03
SSBP3-201ENST00000326956 STIP1P31948 543 aaKnown RBP15.23■□□□□ 0.03
SSBP3-201ENST00000326956 AP3M2P53677 418 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 MYL6P60660 151 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 ACTR2P61160 394 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 MEX3CQ5U5Q3 659 aaKnown RBP15.23■□□□□ 0.03
SSBP3-201ENST00000326956 VSIG10LQ86VR7 867 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 SLC7A3Q8WY07 619 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 MECRQ9BV79 373 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 FAM192AQ9GZU8 254 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 HAPLN2Q9GZV7 340 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 KRT82Q9NSB4 513 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 RNF146Q9NTX7 359 aa15.23■□□□□ 0.03
SSBP3-201ENST00000326956 A0A0B4J269 797 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 RAD17O75943 681 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 IL1BP01584 269 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 CD48P09326 243 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 IL1R2P27930 398 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 NAMPTP43490 491 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 AQP5P55064 265 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 YWHAEP62258 255 aaKnown RBP15.22■□□□□ 0.03
SSBP3-201ENST00000326956 SLC25A11Q02978 314 aaKnown RBP15.22■□□□□ 0.03
SSBP3-201ENST00000326956 ZBTB33Q86T24 672 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 CCNJLQ8IV13 435 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 EMC1Q8N766 993 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 JOSD2Q8TAC2 188 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 GATA6Q92908 595 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 MTMR12Q9C0I1 747 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 ARHGAP42A6NI28 874 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 FAM91A1Q658Y4 838 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 ULK2Q8IYT8 1036 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 ARHGAP18Q8N392 663 aa15.22■□□□□ 0.03
SSBP3-201ENST00000326956 CDHR1Q96JP9 859 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms