RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 ARHGEF7Q14155 803 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 DNAAF5Q86Y56 855 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 MCOLN2Q8IZK6 566 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 CCT7Q99832 543 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 UBE2OQ9C0C9 1292 aaKnown RBP11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 RAB21Q9UL25 225 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 BLOC1S6Q9UL45 172 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 HLA-DPA1P20036 260 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 EPHB2P29323 1055 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 SLC12A3P55017 1021 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 GLRA4Q5JXX5 417 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 LAYNQ6UX15 382 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 CHSY1Q86X52 802 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 YAF2Q8IY57 180 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 ZNF556Q9HAH1 456 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 HNRNPRO43390 633 aaKnown RBP11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 AP1G2O75843 785 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 ASMTLO95671 621 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 GHRP10912 638 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 TAL1P17542 331 aaPredicted RBP11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 CALB2P22676 271 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 MAPRE1Q15691 268 aaKnown RBP11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 AENQ8WTP8 325 aaKnown RBP11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 MTMR8Q96EF0 704 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 SHCBP1LQ9BZQ2 653 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 ZNF229Q9UJW7 825 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 LOC102724159A0A0B4J2E5 919 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 CHRM3P20309 590 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 BACE1P56817 501 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 ST8SIA6P61647 398 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 TWF1Q12792 350 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 PWP2Q15269 919 aaKnown RBP11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 GLB1LQ6UWU2 654 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 TXNRD3Q86VQ6 643 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 SCUBE1Q8IWY4 988 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 CCDC33Q8N5R6 958 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 SLC5A5Q92911 643 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 DDIT4Q9NX09 232 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 RNF112Q9ULX5 631 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 SH3BP1Q9Y3L3 701 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 DEAF1O75398 565 aaPredicted RBP11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 THRAP10827 490 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 BCAT1P54687 386 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 LRRC8BQ6P9F7 803 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 IFNEQ86WN2 208 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 ANKRD13AQ8IZ07 590 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 APBB2Q92870 758 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 LATS2Q9NRM7 1088 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 CISHQ9NSE2 258 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 DTNAQ9Y4J8 743 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 RPS6KL1Q9Y6S9 549 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 KDM1AO60341 852 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 VTNP04004 478 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 SLC2A3P11169 496 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 BGNP21810 368 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 POU4F1Q01851 419 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 ABRAQ8N0Z2 381 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 GPR63Q9BZJ6 419 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 AP4E1Q9UPM8 1137 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 ARHGAP23Q9P227 1491 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 NFIBO00712 420 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 TIMM44O43615 452 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 PCYT1AP49585 367 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 ZNF157P51786 506 aaPredicted RBP11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 MYL6P60660 151 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 C1QBPQ07021 282 aaKnown RBP11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 TATDN2Q93075 761 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 RBBP8Q99708 897 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 RXFP1Q9HBX9 757 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 PDP2Q9P2J9 529 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 VPS9D1Q9Y2B5 631 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 DCCP43146 1447 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 PRRG1O14668 218 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 VCAM1P19320 739 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 CLCN3P51790 818 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 SLC30A9Q6PML9 568 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 LRRC6Q86X45 466 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 APLFQ8IW19 511 aaPredicted RBP11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 FBXO25Q8TCJ0 367 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 CCDC126Q96EE4 140 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 CNDP1Q96KN2 507 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 ASCC2Q9H1I8 757 aaPredicted RBP11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 LRRC40Q9H9A6 602 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 IL1RAPL1Q9NZN1 696 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 FKBP9O95302 570 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 ATP6V1G2O95670 118 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 RALBP11234 206 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 FKBP9P1Q75LS8 142 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 MTDHQ86UE4 582 aaKnown RBP11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 SLC26A11Q86WA9 606 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 KCTD10Q9H3F6 313 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 DLGAP2Q9P1A6 1054 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 DDX20Q9UHI6 824 aaKnown RBP11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 DNAJC16Q9Y2G8 782 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 FAM32AQ9Y421 112 aaKnown RBP11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 VWA5AO00534 786 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 CYB561D2O14569 222 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 SOX10P56693 466 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 LAMTOR4Q0VGL1 99 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms