RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 C6orf10Q5SRN2 563 aa17.13■□□□□ 0.33
CLIP4-201ENST00000320081 C12orf29Q8N999 325 aa17.13■□□□□ 0.33
CLIP4-201ENST00000320081 MAGEB2O15479 319 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 PAMP19021 973 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 TAC1P20366 129 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 OR1G1P47890 313 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 TDRD10Q5VZ19 366 aaKnown RBP17.12■□□□□ 0.33
CLIP4-201ENST00000320081 DENND1BQ6P3S1 775 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 TMEM176AQ96HP8 235 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 NDFIP2Q9NV92 336 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 WHRNQ9P202 907 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 COL20A1Q9P218 1284 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 SUN2Q9UH99 717 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 VAV3Q9UKW4 847 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 UBA1P22314 1058 aaKnown RBP17.12■□□□□ 0.33
CLIP4-201ENST00000320081 GLRA2P23416 452 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 DSG3P32926 999 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 SERPINB5P36952 375 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 PAPOLAP51003 745 aaKnown RBP17.12■□□□□ 0.33
CLIP4-201ENST00000320081 SNAPC2Q13487 334 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.12■□□□□ 0.33
CLIP4-201ENST00000320081 SZRD1Q7Z422 152 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 DCCP43146 1447 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 E5RI56 91 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 CCNE2O96020 404 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 APOEP02649 317 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 EEF1DP3Q658K8 133 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 OLA1Q9NTK5 396 aaKnown RBP17.12■□□□□ 0.33
CLIP4-201ENST00000320081 MID2Q9UJV3 735 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 AP4E1Q9UPM8 1137 aa17.12■□□□□ 0.33
CLIP4-201ENST00000320081 LACTBL1A8MY62 500 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 KPNA2P52292 529 aaKnown RBP17.11■□□□□ 0.33
CLIP4-201ENST00000320081 VCPP55072 806 aaKnown RBP17.11■□□□□ 0.33
CLIP4-201ENST00000320081 METTL7BQ6UX53 244 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 KIAA0319LQ8IZA0 1049 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 ATPAF2Q8N5M1 289 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 PDGFDQ9GZP0 370 aaPredicted RBP17.11■□□□□ 0.33
CLIP4-201ENST00000320081 CCDC90BQ9GZT6 254 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 XAB2Q9HCS7 855 aaKnown RBP17.11■□□□□ 0.33
CLIP4-201ENST00000320081 COG5Q9UP83 839 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 SYNDIG1LA6NDD5 238 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 IRF6O14896 467 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 ANKRD20A8PQ5CZ79 823 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 FRA10AC1Q70Z53 315 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 SPATA2LQ8IUW3 424 aaPredicted RBP17.11■□□□□ 0.33
CLIP4-201ENST00000320081 WARS2Q9UGM6 360 aaKnown RBP17.11■□□□□ 0.33
CLIP4-201ENST00000320081 TRAPPC3O43617 180 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 SNX2O60749 519 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 AVILO75366 819 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 IRF1P10914 325 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 ZFXP17010 805 aaPredicted RBP17.11■□□□□ 0.33
CLIP4-201ENST00000320081 HNRNPH3P31942 346 aaKnown RBP17.11■□□□□ 0.33
CLIP4-201ENST00000320081 ADCYAP1R1P41586 468 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 ZNF157P51786 506 aaPredicted RBP17.11■□□□□ 0.33
CLIP4-201ENST00000320081 MGAT5BQ3V5L5 792 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 ITPRIPL1Q6GPH6 555 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 TMEM154Q6P9G4 183 aa17.11■□□□□ 0.33
CLIP4-201ENST00000320081 ST13P4Q8IZP2 240 aaPredicted RBP17.11■□□□□ 0.33
CLIP4-201ENST00000320081 UMODL1Q5DID0 1318 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 E2F6O75461 281 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 POLBP06746 335 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 CREB1P16220 341 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 PTPRAP18433 802 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 RBL1P28749 1068 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 FAAP100Q0VG06 881 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 AUHQ13825 339 aaKnown RBP17.1■□□□□ 0.33
CLIP4-201ENST00000320081 FAM83AQ86UY5 434 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 IQCKQ8N0W5 287 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 DNAJB3Q8WWF6 145 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 DNAJC9Q8WXX5 260 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 ATRNO75882 1429 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 KCNJ2P63252 427 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 EFTUD2Q15029 972 aaKnown RBP eCLIP17.1■□□□□ 0.33
CLIP4-201ENST00000320081 PRAMEF19Q5SWL8 479 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 TTYH3Q9C0H2 523 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 ADGRA2Q96PE1 1338 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 PIK3CDO00329 1044 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 POMCP01189 267 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 FAM200BP0CF97 657 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 STIP1P31948 543 aaKnown RBP17.1■□□□□ 0.33
CLIP4-201ENST00000320081 GCNT1Q02742 428 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 KCNV1Q6PIU1 500 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 SCG3Q8WXD2 468 aaKnown RBP17.1■□□□□ 0.33
CLIP4-201ENST00000320081 BSNDQ8WZ55 320 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 GEMIN8Q9NWZ8 242 aaKnown RBP17.1■□□□□ 0.33
CLIP4-201ENST00000320081 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.1■□□□□ 0.33
CLIP4-201ENST00000320081 RGPD8O14715 1765 aaPredicted RBP17.1■□□□□ 0.33
CLIP4-201ENST00000320081 MEI4A8MW99 385 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 NFICP08651 508 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 SERPINB3P29508 390 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 RPA3P35244 121 aaPredicted RBP17.1■□□□□ 0.33
CLIP4-201ENST00000320081 MLH1P40692 756 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 KBTBD12Q3ZCT8 623 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 SGO1Q5FBB7 561 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 TFB1MQ8WVM0 346 aaKnown RBP17.1■□□□□ 0.33
CLIP4-201ENST00000320081 SHC3Q92529 594 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 CNPY3Q9BT09 278 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 DNAJC16Q9Y2G8 782 aa17.1■□□□□ 0.33
CLIP4-201ENST00000320081 IL18RAPO95256 599 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 CHEK2O96017 543 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms