RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 ITGB1P05556 798 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 MAPTP10636 758 aaKnown RBP10.34□□□□□ -0.75
KARS-202ENST00000319410 ATP1A3P13637 1013 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 IRS1P35568 1242 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 PBX3P40426 434 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 TMED10P49755 219 aaKnown RBP10.34□□□□□ -0.75
KARS-202ENST00000319410 RAD23BP54727 409 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 RAB15P59190 212 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 CAPSQ13938 189 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 CAMK1Q14012 370 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 CLUL1Q15846 466 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 MUM1Q2TAK8 710 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 COBLL1Q53SF7 1204 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 TRPM8Q7Z2W7 1104 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 CMTR2Q8IYT2 770 aaKnown RBP10.34□□□□□ -0.75
KARS-202ENST00000319410 DAW1Q8N136 415 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 RNF149Q8NC42 400 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 KLHL29Q96CT2 875 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 NLRP4Q96MN2 994 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 GBA3Q9H227 469 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 C1orf112Q9NSG2 853 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 PLAGL2Q9UPG8 496 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 COMMD10Q9Y6G5 202 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 PYGMP11217 842 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 PLS3P13797 630 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 PFKFB1P16118 471 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 GAP43P17677 238 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 GIT2Q14161 759 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 DSC3Q14574 896 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 GSTA3Q16772 222 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 TIGD5Q53EQ6 642 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 PHLDB3Q6NSJ2 640 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 MAEAQ7L5Y9 396 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 ZBTB8OSQ8IWT0 167 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 MMGT1Q8N4V1 131 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 SPERTQ8NA61 448 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 PRCCQ92733 491 aaPredicted RBP10.34□□□□□ -0.75
KARS-202ENST00000319410 CCDC51Q96ER9 411 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 NSUN3Q9H649 340 aaKnown RBP10.34□□□□□ -0.75
KARS-202ENST00000319410 TMEM134Q9H6X4 195 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 ARHGEF3Q9NR81 526 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 TYW1Q9NV66 732 aaKnown RBP10.34□□□□□ -0.75
KARS-202ENST00000319410 CLDND1Q9NY35 253 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 SEPT10Q9P0V9 454 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 GTF3C4Q9UKN8 822 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 HEY1Q9Y5J3 304 aa10.34□□□□□ -0.75
KARS-202ENST00000319410 FNDC1Q4ZHG4 1894 aaPredicted RBP10.33□□□□□ -0.76
KARS-202ENST00000319410 SPTLC1O15269 473 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 POLR2DO15514 142 aaKnown RBP10.33□□□□□ -0.76
KARS-202ENST00000319410 LINC01565O15544 149 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 CBFA2T3O75081 653 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 SERPINB7O75635 380 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 EIF2S1P05198 315 aaKnown RBP10.33□□□□□ -0.76
KARS-202ENST00000319410 RB1P06400 928 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 SRGAP2CP0DJJ0 459 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 IL9P15248 144 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 CCNFP41002 786 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 KCNJ2P63252 427 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 POU5F1Q01860 360 aaKnown RBP10.33□□□□□ -0.76
KARS-202ENST00000319410 DLX2Q07687 328 aaPredicted RBP10.33□□□□□ -0.76
KARS-202ENST00000319410 DMP1Q13316 513 aaPredicted RBP10.33□□□□□ -0.76
KARS-202ENST00000319410 NDUFA5Q16718 116 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 ADGRD2Q7Z7M1 963 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 DCLK2Q8N568 766 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.33□□□□□ -0.76
KARS-202ENST00000319410 STK32AQ8WU08 396 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 CHMP6Q96FZ7 201 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 C7orf25Q9BPX7 421 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 FZD8Q9H461 694 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 TIMMDC1Q9NPL8 285 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 GPRC5CQ9NQ84 441 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 PRMT7Q9NVM4 692 aaPredicted RBP10.33□□□□□ -0.76
KARS-202ENST00000319410 NDUFA13Q9P0J0 144 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 ZNF233A6NK53 670 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 FAM25EA8MYX2 175 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 FBXO21O94952 628 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 TJP3O95049 919 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 KRT18P05783 430 aaKnown RBP10.33□□□□□ -0.76
KARS-202ENST00000319410 RPL17P18621 184 aaKnown RBP10.33□□□□□ -0.76
KARS-202ENST00000319410 DRD4P21917 467 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 TUFMP49411 452 aaKnown RBP10.33□□□□□ -0.76
KARS-202ENST00000319410 VAV2P52735 878 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 HYAL1Q12794 435 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 LIN52Q52LA3 116 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 PAPD7Q5XG87 772 aaKnown RBP10.33□□□□□ -0.76
KARS-202ENST00000319410 RBM23Q86U06 439 aaKnown RBP10.33□□□□□ -0.76
KARS-202ENST00000319410 FSIP1Q8NA03 581 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 TSEN2Q8NCE0 465 aaKnown RBP10.33□□□□□ -0.76
KARS-202ENST00000319410 SPPL3Q8TCT6 385 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 GIPC2Q8TF65 315 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 POF1BQ8WVV4 589 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 KHSRPQ92945 711 aaKnown RBP eCLIP10.33□□□□□ -0.76
KARS-202ENST00000319410 VMP1Q96GC9 406 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 REEP2Q9BRK0 252 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 ST6GALNAC4Q9H4F1 302 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 CD320Q9NPF0 282 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 AASDHPPTQ9NRN7 309 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 SAMSN1Q9NSI8 373 aaKnown RBP10.33□□□□□ -0.76
KARS-202ENST00000319410 SLC12A6Q9UHW9 1150 aa10.33□□□□□ -0.76
KARS-202ENST00000319410 RWDD3Q9Y3V2 267 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms