RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 ZNF341Q9BYN7 854 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 TMEM39BQ9GZU3 492 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 EHMT1Q9H9B1 1298 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 LGALS13Q9UHV8 139 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 GAKO14976 1311 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 MYPNQ86TC9 1320 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 TYROBPO43914 113 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 SUPT3HO75486 399 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 ADRA2BP18089 450 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 PHKA2P46019 1235 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 VCPP55072 806 aaKnown RBP14.81□□□□□ -0.04
PABPC1-201ENST00000318607 CDH6P55285 790 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 PDE1BQ01064 536 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 SLC27A3Q5K4L6 730 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 SPNS2Q8IVW8 549 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 DEFB107AQ8IZN7 70 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 GPD1LQ8N335 351 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 TTC25Q96NG3 672 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 VPS11Q9H270 941 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 APOBEC3GQ9HC16 384 aaKnown RBP14.81□□□□□ -0.04
PABPC1-201ENST00000318607 PARVAQ9NVD7 372 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 NYAP2Q9P242 653 aa14.81□□□□□ -0.04
PABPC1-201ENST00000318607 ZC3H7BQ9UGR2 993 aaKnown RBP14.81□□□□□ -0.04
PABPC1-201ENST00000318607 IQANK1A0A1B0GTG1 560 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 TPD52L2O43399 206 aaKnown RBP14.8□□□□□ -0.04
PABPC1-201ENST00000318607 CST3P01034 146 aaPredicted RBP14.8□□□□□ -0.04
PABPC1-201ENST00000318607 KLRC2P26717 231 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 PKNOX1P55347 436 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 CENPCQ03188 943 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 FSTL1Q12841 308 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 FOXR2Q6PJQ5 311 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 MORC4Q8TE76 937 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 ECSITQ9BQ95 431 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 CENPKQ9BS16 269 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 XPNPEP1Q9NQW7 623 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 FBXO40Q9UH90 709 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 AGO2Q9UKV8 859 aaKnown RBP14.8□□□□□ -0.04
PABPC1-201ENST00000318607 DNAJC16Q9Y2G8 782 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 TDRKHQ9Y2W6 561 aaKnown RBP14.8□□□□□ -0.04
PABPC1-201ENST00000318607 KLHL33A6NCF5 533 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 FOXD2O60548 495 aaPredicted RBP14.8□□□□□ -0.04
PABPC1-201ENST00000318607 NPTXRO95502 500 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 SERPINB5P36952 375 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 MAPK10P53779 464 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 LMNB2Q03252 620 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 C11orf91Q3C1V1 193 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 SFT2D3Q587I9 215 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 DCLK2Q8N568 766 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 ZSCAN18Q8TBC5 510 aaPredicted RBP14.8□□□□□ -0.04
PABPC1-201ENST00000318607 GDPD5Q8WTR4 605 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 RBM41Q96IZ5 413 aaKnown RBP14.8□□□□□ -0.04
PABPC1-201ENST00000318607 KLHL4Q9C0H6 718 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 MTMR12Q9C0I1 747 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 MCF2LO15068 1137 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 MAGEB3O15480 346 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 DCXO43602 365 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 BBOX1O75936 387 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 HNRNPCP07910 306 aaKnown RBP eCLIP14.8□□□□□ -0.045e-7■■■□□ 15.3
PABPC1-201ENST00000318607 PRAMEF18Q5VWM3 479 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 TRMT10BQ6PF06 316 aaKnown RBP14.8□□□□□ -0.04
PABPC1-201ENST00000318607 LCA5Q86VQ0 697 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 ALLCQ8N6M5 410 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 DEPTORQ8TB45 409 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 POLR3FQ9H1D9 316 aaPredicted RBP14.8□□□□□ -0.04
PABPC1-201ENST00000318607 VCX3BQ9H321 246 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 VCX3AQ9NNX9 186 aa14.8□□□□□ -0.04
PABPC1-201ENST00000318607 MTO1Q9Y2Z2 717 aaKnown RBP14.8□□□□□ -0.04
PABPC1-201ENST00000318607 K7ERI5 159 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 KRT3P12035 628 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 UNGP13051 313 aaPredicted RBP14.79□□□□□ -0.04
PABPC1-201ENST00000318607 RAG1P15918 1043 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 FGFR3P22607 806 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 AP1B1Q10567 949 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 KCTD21Q4G0X4 260 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 TFDP3Q5H9I0 405 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 C12orf50Q8NA57 414 aaPredicted RBP14.79□□□□□ -0.04
PABPC1-201ENST00000318607 FAM156AQ8NDB6 213 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 TMEM161BQ8NDZ6 487 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 COA1Q9GZY4 146 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 TTLL3Q9Y4R7 772 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 DOT1LQ8TEK3 1739 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 TNFSF9P41273 254 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 GRIA1P42261 906 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 GALK1P51570 392 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 MYL6P60660 151 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 RPS6P62753 249 aaKnown RBP14.79□□□□□ -0.04
PABPC1-201ENST00000318607 CUL2Q13617 745 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 GK3PQ14409 553 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 RNASEH2BQ5TBB1 312 aaKnown RBP14.79□□□□□ -0.04
PABPC1-201ENST00000318607 MTHFD1LQ6UB35 978 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 TNS4Q8IZW8 715 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 ARL10Q8N8L6 244 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 SNX31Q8N9S9 440 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 EXD1Q8NHP7 514 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 OPTNQ96CV9 577 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 BRWD3Q6RI45 1802 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 GOLGA8TH3BQL2 631 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 ALOX15BO15296 676 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 RFX1P22670 979 aa14.79□□□□□ -0.04
PABPC1-201ENST00000318607 KLF1Q13351 362 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms