RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 NIPA2Q8N8Q9 360 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 SMG8Q8ND04 991 aaKnown RBP14.88□□□□□ -0.03
VRK3-201ENST00000316763 ARHGEF2Q92974 986 aaKnown RBP14.88□□□□□ -0.03
VRK3-201ENST00000316763 FAXDC2Q96IV6 333 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 ZNF317Q96PQ6 595 aaPredicted RBP14.88□□□□□ -0.03
VRK3-201ENST00000316763 AGO3Q9H9G7 860 aaKnown RBP14.88□□□□□ -0.03
VRK3-201ENST00000316763 NINJ2Q9NZG7 142 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 CNTN3Q9P232 1028 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 ZNF148Q9UQR1 794 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 DRG1Q9Y295 367 aaKnown RBP14.88□□□□□ -0.03
VRK3-201ENST00000316763 SQORQ9Y6N5 450 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 PI4K2BG5E9Z4 385 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 GPR182O15218 404 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 RECQL4O94761 1208 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 KLRC2P26717 231 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 STAT4Q14765 748 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 CNGA2Q16280 664 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 MFSD7Q6UXD7 560 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 SCARA5Q6ZMJ2 495 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 EXOC3L1Q86VI1 746 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 PACS2Q86VP3 889 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 CCDC197Q8NCU1 140 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 ZMAT2Q96NC0 199 aaKnown RBP14.88□□□□□ -0.03
VRK3-201ENST00000316763 OSBPL7Q9BZF2 842 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 LHX5Q9H2C1 402 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 VRTNQ9H8Y1 702 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 SAMD15Q9P1V8 674 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 ITGA11Q9UKX5 1188 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 IPPQ9Y573 584 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 F8VP50 259 aa14.87□□□□□ -0.03
VRK3-201ENST00000316763 CLTBP09497 229 aa14.87□□□□□ -0.03
VRK3-201ENST00000316763 ASPAP45381 313 aa14.87□□□□□ -0.03
VRK3-201ENST00000316763 ACTN3Q08043 901 aaPredicted RBP14.87□□□□□ -0.03
VRK3-201ENST00000316763 LPIN1Q14693 890 aa14.87□□□□□ -0.03
VRK3-201ENST00000316763 P3H1Q32P28 736 aa14.87□□□□□ -0.03
VRK3-201ENST00000316763 ATP13A4Q4VNC1 1196 aa14.87□□□□□ -0.03
VRK3-201ENST00000316763 TFDP3Q5H9I0 405 aa14.87□□□□□ -0.03
VRK3-201ENST00000316763 ZNF667Q5HYK9 610 aa14.87□□□□□ -0.03
VRK3-201ENST00000316763 PPP1R15BQ5SWA1 713 aa14.87□□□□□ -0.03
VRK3-201ENST00000316763 TWF2Q6IBS0 349 aaKnown RBP14.87□□□□□ -0.03
VRK3-201ENST00000316763 HIBCHQ6NVY1 386 aaPredicted RBP14.87□□□□□ -0.03
VRK3-201ENST00000316763 ZCCHC9Q8N567 271 aaKnown RBP14.87□□□□□ -0.03
VRK3-201ENST00000316763 DYDC1Q8WWB3 177 aa14.87□□□□□ -0.03
VRK3-201ENST00000316763 KIF12Q96FN5 646 aa14.87□□□□□ -0.03
VRK3-201ENST00000316763 TSPAN18Q96SJ8 248 aa14.87□□□□□ -0.03
VRK3-201ENST00000316763 PRMT1Q99873 361 aaKnown RBP14.87□□□□□ -0.03
VRK3-201ENST00000316763 FAM118BQ9BPY3 351 aa14.87□□□□□ -0.03
VRK3-201ENST00000316763 CXCL16Q9H2A7 254 aa14.87□□□□□ -0.03
VRK3-201ENST00000316763 RNF39Q9H2S5 420 aa14.87□□□□□ -0.03
VRK3-201ENST00000316763 TMEM39AQ9NV64 488 aa14.87□□□□□ -0.03
VRK3-201ENST00000316763 DNAJC17Q9NVM6 304 aaKnown RBP14.87□□□□□ -0.03
VRK3-201ENST00000316763 KLHL11Q9NVR0 708 aa14.87□□□□□ -0.03
VRK3-201ENST00000316763 DNALI1O14645 258 aaPredicted RBP14.86□□□□□ -0.03
VRK3-201ENST00000316763 ITGB3P05106 788 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 KRT19P08727 400 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 KRT10P13645 584 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 CD19P15391 556 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 ATICP31939 592 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 ZNF252P-AS1Q0IIN9 211 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 BFSP2Q13515 415 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 HADHQ16836 314 aaKnown RBP14.86□□□□□ -0.03
VRK3-201ENST00000316763 CCDC38Q502W7 563 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 TRAF7Q6Q0C0 670 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 POLNQ7Z5Q5 900 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 TFAP2BQ92481 460 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 TTC25Q96NG3 672 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 HIPK3Q9H422 1215 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 DPP3Q9NY33 737 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 WDR35Q9P2L0 1181 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 NXF1Q9UBU9 619 aaKnown RBP14.86□□□□□ -0.03
VRK3-201ENST00000316763 TBX21Q9UL17 535 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 PADI3Q9ULW8 664 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 hCG_1818297A0A087WSY0 165 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 LRRD1A4D1F6 860 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 SIGLEC16A6NMB1 481 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 CDH16O75309 829 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 STAU1O95793 577 aaKnown RBP14.86□□□□□ -0.03
VRK3-201ENST00000316763 VIMP08670 466 aaKnown RBP14.86□□□□□ -0.03
VRK3-201ENST00000316763 ABHD2P08910 425 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 KCNE1P15382 129 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 AKAP5P24588 427 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 RDXP35241 583 aaKnown RBP14.86□□□□□ -0.03
VRK3-201ENST00000316763 MAGEA4P43358 317 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 ANKS1BQ7Z6G8 1248 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 TMEM130Q8N3G9 435 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 RIBC1Q8N443 379 aaPredicted RBP14.86□□□□□ -0.03
VRK3-201ENST00000316763 WDTC1Q8N5D0 677 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 ALLCQ8N6M5 410 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 CFAP57Q96MR6 1250 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 RBM15Q96T37 977 aaKnown RBP eCLIP14.86□□□□□ -0.033e-6■■■■□ 20.8
VRK3-201ENST00000316763 FRMD8P1Q9BZ68 369 aaPredicted RBP14.86□□□□□ -0.03
VRK3-201ENST00000316763 LGALS13Q9UHV8 139 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 DNPEPQ9ULA0 475 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 EFR3BQ9Y2G0 817 aa14.86□□□□□ -0.03
VRK3-201ENST00000316763 SCN5AQ14524 2016 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 PITPNM1O00562 1244 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 KRT7P08729 469 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 GHRP10912 638 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 KRT3P12035 628 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 P4HA1P13674 534 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms