RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 C12orf29Q8N999 325 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 B3GALNT2Q8NCR0 500 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 IRGQQ8WZA9 623 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 TSPYL2Q9H2G4 693 aaPredicted RBP7.54□□□□□ -1.2
NPHP1-201ENST00000316534 GPBP1L1Q9HC44 474 aaPredicted RBP7.54□□□□□ -1.2
NPHP1-201ENST00000316534 CALCOCO1Q9P1Z2 691 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 CDH9Q9ULB4 789 aa7.54□□□□□ -1.2
NPHP1-201ENST00000316534 SMAPO00193 183 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 TJP3O95049 919 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 ECEL1O95672 775 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 ABHD2P08910 425 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 EIF3BP55884 814 aaKnown RBP7.53□□□□□ -1.2
NPHP1-201ENST00000316534 DPYSL3Q14195 570 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 MRPL58Q14197 206 aaKnown RBP7.53□□□□□ -1.2
NPHP1-201ENST00000316534 ADGRF2Q8IZF7 708 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 APPL2Q8NEU8 664 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 MAGOHBQ96A72 148 aaKnown RBP7.53□□□□□ -1.2
NPHP1-201ENST00000316534 HEXIM2Q96MH2 286 aaKnown RBP7.53□□□□□ -1.2
NPHP1-201ENST00000316534 ZNF670Q9BS34 389 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 PABPC3Q9H361 631 aaKnown RBP7.53□□□□□ -1.2
NPHP1-201ENST00000316534 CRTAC1Q9NQ79 661 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 FETUBQ9UGM5 382 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 ABT1Q9ULW3 272 aaKnown RBP7.53□□□□□ -1.2
NPHP1-201ENST00000316534 A0A1W2PQ45 241 aaPredicted RBP7.53□□□□□ -1.2
NPHP1-201ENST00000316534 A0A1W2PQY0 241 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 SPDYE4A6NLX3 237 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 MEIS3P2A8K0S8 358 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 TSHRP16473 764 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 MIPP30301 263 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 GNL1P36915 607 aaPredicted RBP7.53□□□□□ -1.2
NPHP1-201ENST00000316534 HDAC4P56524 1084 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 CBX1P83916 185 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 PDE4CQ08493 712 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 ZNF844Q08AG5 666 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 TRMT10CQ7L0Y3 403 aaKnown RBP7.53□□□□□ -1.2
NPHP1-201ENST00000316534 RNF180Q86T96 592 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 TTC13Q8NBP0 860 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 PGM2Q96G03 612 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 SNF8Q96H20 258 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 TNIP3Q96KP6 325 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 SUSD3Q96L08 255 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 SLC9A7Q96T83 725 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 NPY6RQ99463 290 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 ACBD6Q9BR61 282 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 B3GNT5Q9BYG0 378 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 CRISPLD2Q9H0B8 497 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 TSPYL1Q9H0U9 437 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 OGDHLQ9ULD0 1010 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 SNX9Q9Y5X1 595 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 NYNRINQ9P2P1 1898 aaKnown RBP7.53□□□□□ -1.2
NPHP1-201ENST00000316534 ESYT3A0FGR9 886 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 GOLGA6BA6NDN3 693 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 APOC4-APOC2K7ER74 178 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 TBC1D4O60343 1298 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 APOC2P02655 101 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 FYNP06241 537 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 TGM2P21980 687 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 ZNF394Q53GI3 561 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 DAB2IPQ5VWQ8 1189 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 KDM7AQ6ZMT4 941 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 CLEC20AQ6ZU45 233 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 HOOK3Q86VS8 718 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 DDX42Q86XP3 938 aaKnown RBP eCLIP7.53□□□□□ -1.2
NPHP1-201ENST00000316534 FAM126BQ8IXS8 530 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 HACE1Q8IYU2 909 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 RNF168Q8IYW5 571 aaPredicted RBP7.53□□□□□ -1.2
NPHP1-201ENST00000316534 PQLC3Q8N755 202 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 BBOF1Q8ND07 529 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 ZMIZ2Q8NF64 920 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 OLFM3Q96PB7 478 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 PCDH9Q9HC56 1237 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 DSEQ9UL01 958 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 USP18Q9UMW8 372 aa7.53□□□□□ -1.2
NPHP1-201ENST00000316534 M0QZ92 97 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 ARVCFO00192 962 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 DNM1LO00429 736 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 PITPNM1O00562 1244 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 THP07101 528 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 PTPN1P18031 435 aaKnown RBP7.52□□□□□ -1.21
NPHP1-201ENST00000316534 KRT17Q04695 432 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 XRCC4Q13426 336 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 SLMAPQ14BN4 828 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 NOMO1Q15155 1222 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 ATP13A4Q4VNC1 1196 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 BOLA3Q53S33 107 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 ZC3H12AQ5D1E8 599 aaKnown RBP7.52□□□□□ -1.21
NPHP1-201ENST00000316534 RNASEH2BQ5TBB1 312 aaKnown RBP7.52□□□□□ -1.21
NPHP1-201ENST00000316534 ACOT1Q86TX2 421 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 ZCCHC9Q8N567 271 aaKnown RBP7.52□□□□□ -1.21
NPHP1-201ENST00000316534 MYCBPAPQ8TBZ2 947 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 CD99L2Q8TCZ2 262 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 NTAN1Q96AB6 310 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 RNF25Q96BH1 459 aaPredicted RBP7.52□□□□□ -1.21
NPHP1-201ENST00000316534 PGBD4Q96DM1 585 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 FMO2Q99518 471 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 DNAI2Q9GZS0 605 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 RSAD1Q9HA92 442 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 NEU3Q9UQ49 428 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 DENND4CQ5VZ89 1909 aa7.52□□□□□ -1.21
NPHP1-201ENST00000316534 FAM92AA1XBS5 289 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms