RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 TRAF3IP3Q9Y228 551 aa12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 ACKR2O00590 384 aa12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 NCAM2O15394 837 aa12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 OCM2P0CE71 109 aa12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 OCMP0CE72 109 aaPredicted RBP12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 ZNF286BP0CG31 522 aa12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 LRRC74AQ0VAA2 488 aa12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 EFEMP1Q12805 493 aa12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 LY6KQ17RY6 165 aa12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 OVOS1Q6IE37 1185 aa12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 NT5DC4Q86YG4 428 aa12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 ABRAQ8N0Z2 381 aa12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 RXFP2Q8WXD0 754 aa12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 CDK5RAP1Q96SZ6 601 aaKnown RBP12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 SYT15Q9BQS2 421 aa12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 BRD8Q9H0E9 1235 aa12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 CHST12Q9NRB3 414 aa12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 INTS13Q9NVM9 706 aa12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 BARX2Q9UMQ3 279 aaPredicted RBP12.4□□□□□ -0.42
AMBRA1-201ENST00000314845 EVPLLA8MZ36 301 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 VPS26AO75436 327 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 SRP72O76094 671 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 PTPN7P35236 360 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 AVPR1AP37288 418 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 ATN1P54259 1190 aaPredicted RBP12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 OTUD4Q01804 1114 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 AASDHQ4L235 1098 aaPredicted RBP12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 KCNT1Q5JUK3 1230 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 SLC30A10Q6XR72 485 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 RBM43Q6ZSC3 357 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 OTOP1Q7RTM1 612 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 IFNEQ86WN2 208 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 NUP93Q8N1F7 819 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 SLC5A5Q92911 643 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 DDX4Q9NQI0 724 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 CDV3Q9UKY7 258 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 USP18Q9UMW8 372 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 PCDHB12Q9Y5F1 795 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 SPATA31D1Q6ZQQ2 1576 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 MTA1Q13330 715 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 FLOT2Q14254 428 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 DENND1BQ6P3S1 775 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 ZNF410Q86VK4 478 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 PARP9Q8IXQ6 854 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 KCNV2Q8TDN2 545 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 CCDC126Q96EE4 140 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 UBE2OQ9C0C9 1292 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 WWOXQ9NZC7 414 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 DRG1Q9Y295 367 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 ITSN1Q15811 1721 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 TRPC5OSA6NMA1 111 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 ADCY3O60266 1144 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 LZTS3O60299 673 aaPredicted RBP12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 RNASEH1O60930 286 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 ADORA2AP29274 412 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 PSMC6P62333 389 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 ITIH5Q86UX2 942 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 RFWD2Q8NHY2 731 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 ERP27Q96DN0 273 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 GLIS2Q9BZE0 524 aaPredicted RBP12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 NMRK1Q9NWW6 199 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 TMEM161AQ9NX61 479 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 COL5A2P05997 1499 aaPredicted RBP12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 PHF20L1A8MW92 1017 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 GLRA3O75311 464 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 TKTL1P51854 596 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 MAP3K7CLP57077 242 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 KCNK10P57789 538 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 E2F4Q16254 413 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 CLEC16AQ2KHT3 1053 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 C2CD6Q53TS8 623 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 MDH1BQ5I0G3 518 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 USP50Q70EL3 339 aaPredicted RBP12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 REXO1L1PQ8IX06 675 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 DDI1Q8WTU0 396 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 HNRNPLLQ8WVV9 542 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 TBCBQ99426 244 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 FBXO44Q9H4M3 255 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 MANSC1Q9H8J5 431 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 SLC25A13Q9UJS0 675 aa12.39□□□□□ -0.43
AMBRA1-201ENST00000314845 EFCAB14O75071 495 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 SLITRK3O94933 977 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 FAM107AO95990 144 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 RHOCP08134 193 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 ITGALP20701 1170 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 DENND5BQ6ZUT9 1274 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 NYAP1Q6ZVC0 841 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 TLK2Q86UE8 772 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 DNAJB3Q8WWF6 145 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 RIN2Q8WYP3 895 aaPredicted RBP12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 VPS28Q9UK41 221 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 IPPQ9Y573 584 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 HNRNPRO43390 633 aaKnown RBP12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 LSP1P33241 339 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 GCNT1Q02742 428 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 DDR1Q08345 913 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 IQSEC1Q6DN90 963 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 PPP4R4Q6NUP7 873 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 UNC45BQ8IWX7 931 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 CYP2W1Q8TAV3 490 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms