RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 RNF38Q9H0F5 515 aa18.12■□□□□ 0.49
PUF60-201ENST00000313352 IL37Q9NZH6 218 aa18.12■□□□□ 0.49
PUF60-201ENST00000313352 GMIPQ9P107 970 aa18.12■□□□□ 0.49
PUF60-201ENST00000313352 UXTQ9UBK9 157 aaPredicted RBP18.12■□□□□ 0.49
PUF60-201ENST00000313352 APEX2Q9UBZ4 518 aa18.12■□□□□ 0.49
PUF60-201ENST00000313352 CA14Q9ULX7 337 aa18.12■□□□□ 0.49
PUF60-201ENST00000313352 KRBA1A5PL33 1030 aa18.11■□□□□ 0.49
PUF60-201ENST00000313352 TMEM221A6NGB7 291 aa18.11■□□□□ 0.49
PUF60-201ENST00000313352 M0R296 226 aa18.11■□□□□ 0.49
PUF60-201ENST00000313352 O00370 1275 aa18.11■□□□□ 0.49
PUF60-201ENST00000313352 FGF19O95750 216 aa18.11■□□□□ 0.49
PUF60-201ENST00000313352 SRFP11831 508 aa18.11■□□□□ 0.49
PUF60-201ENST00000313352 NFKBIBQ15653 356 aa18.11■□□□□ 0.49
PUF60-201ENST00000313352 ZSCAN23Q3MJ62 389 aa18.11■□□□□ 0.49
PUF60-201ENST00000313352 SGO2Q562F6 1265 aa18.11■□□□□ 0.49
PUF60-201ENST00000313352 MON1AQ86VX9 555 aa18.11■□□□□ 0.49
PUF60-201ENST00000313352 UBALD2Q8IYN6 164 aa18.11■□□□□ 0.49
PUF60-201ENST00000313352 FBXO32Q969P5 355 aa18.11■□□□□ 0.49
PUF60-201ENST00000313352 NXPE3Q969Y0 559 aa18.11■□□□□ 0.49
PUF60-201ENST00000313352 LRFN3Q9BTN0 628 aa18.11■□□□□ 0.49
PUF60-201ENST00000313352 TRPV4Q9HBA0 871 aa18.11■□□□□ 0.49
PUF60-201ENST00000313352 NUP210Q8TEM1 1887 aaPredicted RBP18.1■□□□□ 0.49
PUF60-201ENST00000313352 CYP26A1O43174 497 aa18.1■□□□□ 0.49
PUF60-201ENST00000313352 KRT5P13647 590 aa18.1■□□□□ 0.49
PUF60-201ENST00000313352 ZNF165P49910 485 aa18.1■□□□□ 0.49
PUF60-201ENST00000313352 COPB1P53618 953 aaKnown RBP18.1■□□□□ 0.49
PUF60-201ENST00000313352 YWHAEP62258 255 aaKnown RBP18.1■□□□□ 0.49
PUF60-201ENST00000313352 PDE4CQ08493 712 aa18.1■□□□□ 0.49
PUF60-201ENST00000313352 TTC39CQ8N584 583 aa18.1■□□□□ 0.49
PUF60-201ENST00000313352 TTC16Q8NEE8 873 aa18.1■□□□□ 0.49
PUF60-201ENST00000313352 NDRG1Q92597 394 aaKnown RBP18.1■□□□□ 0.49
PUF60-201ENST00000313352 GPR88Q9GZN0 384 aa18.1■□□□□ 0.49
PUF60-201ENST00000313352 OSER1Q9NX31 292 aa18.1■□□□□ 0.49
PUF60-201ENST00000313352 DNAJC12Q9UKB3 198 aa18.1■□□□□ 0.49
PUF60-201ENST00000313352 CNTN6Q9UQ52 1028 aa18.1■□□□□ 0.49
PUF60-201ENST00000313352 FHOD1Q9Y613 1164 aa18.1■□□□□ 0.49
PUF60-201ENST00000313352 EPHB6O15197 1021 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 GABBR2O75899 941 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 VDRP11473 427 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 IQCB1Q15051 598 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 PIGZQ86VD9 579 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 ANKRD52Q8NB46 1076 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 CEP295NLQ96MC4 621 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 LSM14BQ9BX40 385 aaKnown RBP18.09■□□□□ 0.49
PUF60-201ENST00000313352 TRPM5Q9NZQ8 1165 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 WDFY4Q6ZS81 3184 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 PIK3R2O00459 728 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 GPR37L1O60883 481 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 GDI1P31150 447 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 USP8P40818 1118 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 PKDCCQ504Y2 493 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 SIX5Q8N196 739 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 FAM124BQ9H5Z6 455 aaPredicted RBP18.09■□□□□ 0.49
PUF60-201ENST00000313352 CCSER2Q9H7U1 834 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 NMUR1Q9HB89 426 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 LIMA1Q9UHB6 759 aaKnown RBP18.09■□□□□ 0.49
PUF60-201ENST00000313352 MYO16Q9Y6X6 1858 aa18.09■□□□□ 0.49
PUF60-201ENST00000313352 FAM92AA1XBS5 289 aa18.08■□□□□ 0.48
PUF60-201ENST00000313352 FOXN3O00409 490 aaPredicted RBP18.08■□□□□ 0.48
PUF60-201ENST00000313352 SCAMP3O14828 347 aaKnown RBP18.08■□□□□ 0.48
PUF60-201ENST00000313352 RTN3O95197 1032 aaPredicted RBP18.08■□□□□ 0.48
PUF60-201ENST00000313352 PAEPP09466 180 aa18.08■□□□□ 0.48
PUF60-201ENST00000313352 PSMC3P17980 439 aa18.08■□□□□ 0.48
PUF60-201ENST00000313352 AVPR1AP37288 418 aa18.08■□□□□ 0.48
PUF60-201ENST00000313352 KIF11P52732 1056 aa18.08■□□□□ 0.48
PUF60-201ENST00000313352 TMEM31Q5JXX7 168 aa18.08■□□□□ 0.48
PUF60-201ENST00000313352 KLHDC7AQ5VTJ3 777 aa18.08■□□□□ 0.48
PUF60-201ENST00000313352 LUZP1Q86V48 1076 aa18.08■□□□□ 0.48
PUF60-201ENST00000313352 MFSD6LQ8IWD5 586 aa18.08■□□□□ 0.48
PUF60-201ENST00000313352 TTC8Q8TAM2 541 aa18.08■□□□□ 0.48
PUF60-201ENST00000313352 BPIFA3Q9BQP9 254 aa18.08■□□□□ 0.48
PUF60-201ENST00000313352 CBX8Q9HC52 389 aa18.08■□□□□ 0.48
PUF60-201ENST00000313352 NUDT5Q9UKK9 219 aa18.08■□□□□ 0.48
PUF60-201ENST00000313352 FBXL21Q9UKT6 434 aa18.08■□□□□ 0.48
PUF60-201ENST00000313352 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.08■□□□□ 0.48
PUF60-201ENST00000313352 TBX18O95935 607 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 OAS1P00973 400 aaKnown RBP18.07■□□□□ 0.48
PUF60-201ENST00000313352 CKMP06732 381 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 HDCP19113 662 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 TRIM21P19474 475 aaKnown RBP18.07■□□□□ 0.48
PUF60-201ENST00000313352 CDK11BP21127 795 aaKnown RBP18.07■□□□□ 0.48
PUF60-201ENST00000313352 CD72P21854 359 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 MFAP3P55082 362 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 TNK2Q07912 1038 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 SHC3Q92529 594 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 PBXIP1Q96AQ6 731 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 SLITRK1Q96PX8 696 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 TRMT61BQ9BVS5 477 aaKnown RBP18.07■□□□□ 0.48
PUF60-201ENST00000313352 C1QTNF1Q9BXJ1 281 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 SLC2A4RGQ9NR83 387 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 HEBP1Q9NRV9 189 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 TDP1Q9NUW8 608 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 SMPD4Q9NXE4 827 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 FAM170AA1A519 330 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 SHISA7A6NL88 538 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 ARNTLO00327 626 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 USP17L7P0C7H9 530 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 ZDHHC11BP0C7U3 371 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 RGS7P49802 495 aa18.07■□□□□ 0.48
PUF60-201ENST00000313352 TRIM68Q6AZZ1 485 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms