RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 SPATA17Q96L03 361 aa12.75□□□□□ -0.37
SCFD1-201ENST00000311943 GPR88Q9GZN0 384 aa12.75□□□□□ -0.37
SCFD1-201ENST00000311943 ZFP14Q9HCL3 533 aa12.75□□□□□ -0.37
SCFD1-201ENST00000311943 CSNK1G1Q9HCP0 422 aa12.75□□□□□ -0.37
SCFD1-201ENST00000311943 DMAP1Q9NPF5 467 aaPredicted RBP12.75□□□□□ -0.37
SCFD1-201ENST00000311943 GTSE1Q9NYZ3 720 aa12.75□□□□□ -0.37
SCFD1-201ENST00000311943 GDE1Q9NZC3 331 aa12.75□□□□□ -0.37
SCFD1-201ENST00000311943 FHOD1Q9Y613 1164 aa12.75□□□□□ -0.37
SCFD1-201ENST00000311943 ZNF840PA6NDX5 716 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 PMM2O15305 246 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 FAM200BP0CF97 657 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 KRT5P13647 590 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 ALADP13716 330 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 ANXA13P27216 316 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 GDI1P31150 447 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 USP8P40818 1118 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 NFKBIBQ15653 356 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 EXOC3L4Q17RC7 722 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 LUZP1Q86V48 1076 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 PIGZQ86VD9 579 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 CMTM8Q8IZV2 173 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 NUP93Q8N1F7 819 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 CLEC4CQ8WTT0 213 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 FOXQ1Q9C009 403 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 TASP1Q9H6P5 420 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 PLCB1Q9NQ66 1216 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 GKN1Q9NS71 199 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 IGSF9Q9P2J2 1179 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 DACH1Q9UI36 760 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 ZDBF2Q9HCK1 2354 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 O00370 1275 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 TRIM66O15016 1216 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 TEX33O43247 280 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 FGFR1OPO95684 399 aaKnown RBP12.74□□□□□ -0.37
SCFD1-201ENST00000311943 ZNF18P17022 549 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 MYL5Q02045 173 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 SIGLEC14Q08ET2 396 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 ZSCAN23Q3MJ62 389 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 FLCNQ8NFG4 579 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 PBXIP1Q96AQ6 731 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 TRMT2BQ96GJ1 504 aaKnown RBP12.74□□□□□ -0.37
SCFD1-201ENST00000311943 TTLL2Q9BWV7 592 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 LINC00597Q9H2U6 94 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 CYTH4Q9UIA0 394 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 DNAJC12Q9UKB3 198 aa12.74□□□□□ -0.37
SCFD1-201ENST00000311943 TICRRQ7Z2Z1 1910 aa12.73□□□□□ -0.37
SCFD1-201ENST00000311943 FOXN3O00409 490 aaPredicted RBP12.73□□□□□ -0.37
SCFD1-201ENST00000311943 P4HA2O15460 535 aa12.73□□□□□ -0.37
SCFD1-201ENST00000311943 USP17L7P0C7H9 530 aa12.73□□□□□ -0.37
SCFD1-201ENST00000311943 YWHAQP27348 245 aa12.73□□□□□ -0.37
SCFD1-201ENST00000311943 ZNF132P52740 706 aa12.73□□□□□ -0.37
SCFD1-201ENST00000311943 IQCB1Q15051 598 aa12.73□□□□□ -0.37
SCFD1-201ENST00000311943 DENND1BQ6P3S1 775 aa12.73□□□□□ -0.37
SCFD1-201ENST00000311943 GBP6Q6ZN66 633 aa12.73□□□□□ -0.37
SCFD1-201ENST00000311943 SCD5Q86SK9 330 aa12.73□□□□□ -0.37
SCFD1-201ENST00000311943 FBXO32Q969P5 355 aa12.73□□□□□ -0.37
SCFD1-201ENST00000311943 CHFRQ96EP1 664 aa12.73□□□□□ -0.37
SCFD1-201ENST00000311943 LSM14BQ9BX40 385 aaKnown RBP12.73□□□□□ -0.37
SCFD1-201ENST00000311943 DUSP16Q9BY84 665 aa12.73□□□□□ -0.37
SCFD1-201ENST00000311943 KIF26AQ9ULI4 1882 aaPredicted RBP12.73□□□□□ -0.37
SCFD1-201ENST00000311943 ARNTLO00327 626 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 COCHO43405 550 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 MICAL2O94851 1124 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 LETM1O95202 739 aaPredicted RBP12.72□□□□□ -0.37
SCFD1-201ENST00000311943 SRFP11831 508 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 ARSAP15289 507 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 HDCP19113 662 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 CDC25CP30307 473 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 COPB1P53618 953 aaKnown RBP12.72□□□□□ -0.37
SCFD1-201ENST00000311943 TMEM31Q5JXX7 168 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 CWF19L1Q69YN2 538 aaKnown RBP12.72□□□□□ -0.37
SCFD1-201ENST00000311943 PMF1Q6P1K2 205 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 MON1AQ86VX9 555 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 PASD1Q8IV76 773 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 MRPS31Q92665 395 aaKnown RBP12.72□□□□□ -0.37
SCFD1-201ENST00000311943 ELSPBP1Q96BH3 223 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 CBX8Q9HC52 389 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 FAM207AQ9NSI2 230 aaPredicted RBP12.72□□□□□ -0.37
SCFD1-201ENST00000311943 APEX2Q9UBZ4 518 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 FBXL21Q9UKT6 434 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 WNT6Q9Y6F9 365 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 MYO16Q9Y6X6 1858 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 A0A1W2PQH9 124 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 ECI2O75521 394 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 CKMP06732 381 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 ZNF165P49910 485 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 GCNT1Q02742 428 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 PKDCCQ504Y2 493 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 ARHGAP17Q68EM7 881 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 TXNDC11Q6PKC3 985 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 BHLHA9Q7RTU4 235 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 SLC47A2Q86VL8 602 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 TMEM105Q8N8V8 129 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 SECISBP2LQ93073 1101 aaKnown RBP12.72□□□□□ -0.37
SCFD1-201ENST00000311943 P2RY11Q96G91 374 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 NAP1L5Q96NT1 182 aaPredicted RBP12.72□□□□□ -0.37
SCFD1-201ENST00000311943 EBF3Q9H4W6 596 aa12.72□□□□□ -0.37
SCFD1-201ENST00000311943 PATJQ8NI35 1801 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 GPR37L1O60883 481 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 DCNP07585 359 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms