RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 IRAK4Q9NWZ3 460 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 PCDHB8Q9UN66 801 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 SSX2IPQ9Y2D8 614 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 R3HCC1Q9Y3T6 440 aaKnown RBP8.74□□□□□ -1.01
CHD6-201ENST00000309279 PCDHGB3Q9Y5G1 929 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.74□□□□□ -1.01
CHD6-201ENST00000309279 ARHGEF37A1IGU5 675 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 C2orf71A6NGG8 1288 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 HIDE1A8MVS5 230 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 KCNJ18B7U540 433 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 I3L4J1 428 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 TBC1D4O60343 1298 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 N4BP1O75113 896 aaKnown RBP8.73□□□□□ -1.01
CHD6-201ENST00000309279 PHACTR2O75167 634 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 KATNA1O75449 491 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 OAZ2O95190 189 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 CXCL14O95715 111 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 CYP11A1P05108 521 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 URODP06132 367 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 MYCLP1P12525 358 aaPredicted RBP8.73□□□□□ -1.01
CHD6-201ENST00000309279 CAPN3P20807 821 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 GRK2P25098 689 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 TKTP29401 623 aaKnown RBP8.73□□□□□ -1.01
CHD6-201ENST00000309279 CTNNA1P35221 906 aaKnown RBP8.73□□□□□ -1.01
CHD6-201ENST00000309279 ETFBP38117 255 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 GLUD2P49448 558 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 MRE11P49959 708 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 MXI1P50539 228 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 SESN3P58005 492 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 NSUN2Q08J23 767 aaKnown RBP eCLIP8.73□□□□□ -1.01
CHD6-201ENST00000309279 TBX2Q13207 712 aaPredicted RBP8.73□□□□□ -1.01
CHD6-201ENST00000309279 KCNJ12Q14500 433 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 FILIP1LQ4L180 1135 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 KIAA1841Q6NSI8 718 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 OTOP3Q7RTS5 596 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 SIX5Q8N196 739 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 DEPDC4Q8N2C3 294 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 FBXL13Q8NEE6 735 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 SPATA18Q8TC71 538 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 TAS1R2Q8TE23 839 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 NACC2Q96BF6 587 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 FAXDC2Q96IV6 333 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 B3GALT6Q96L58 329 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 TUBGCP2Q9BSJ2 902 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 SLC7A5P2Q9GIP4 190 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 RXFP1Q9HBX9 757 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 TRPV5Q9NQA5 729 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 ENTPD7Q9NQZ7 604 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 MRPL17Q9NRX2 175 aaKnown RBP8.73□□□□□ -1.01
CHD6-201ENST00000309279 RASSF1Q9NS23 344 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 RAB20Q9NX57 234 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 OBP2AQ9NY56 170 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 CPSF2Q9P2I0 782 aaKnown RBP8.73□□□□□ -1.01
CHD6-201ENST00000309279 DSEQ9UL01 958 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 TSC2P49815 1807 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 BRWD1Q9NSI6 2320 aa8.73□□□□□ -1.01
CHD6-201ENST00000309279 MTCL1Q9Y4B5 1905 aaKnown RBP8.73□□□□□ -1.01
CHD6-201ENST00000309279 CYB561D2O14569 222 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 C1RP00736 705 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 HLA-DRAP01903 254 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 AFPP02771 609 aaKnown RBP8.72□□□□□ -1.01
CHD6-201ENST00000309279 ODC1P11926 461 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 PLIN5Q00G26 463 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 MAN2A1Q16706 1144 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 SOWAHAQ2M3V2 549 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 WDR72Q3MJ13 1102 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 MIIPQ5JXC2 388 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 VARS2Q5ST30 1063 aaKnown RBP8.72□□□□□ -1.01
CHD6-201ENST00000309279 PLPP4Q5VZY2 271 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 DSTYKQ6XUX3 929 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 CEP57Q86XR8 500 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 AOPEPQ8N6M6 819 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 TOP6BLQ8N6T0 577 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 LMO3Q8TAP4 145 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 ANKRD49Q8WVL7 239 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 MYLIPQ8WY64 445 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 RIN2Q8WYP3 895 aaPredicted RBP8.72□□□□□ -1.01
CHD6-201ENST00000309279 MAML1Q92585 1016 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 SEMA4DQ92854 862 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 RMDN2Q96LZ7 410 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 OXCT2Q9BYC2 517 aaPredicted RBP8.72□□□□□ -1.01
CHD6-201ENST00000309279 NSUN3Q9H649 340 aaKnown RBP8.72□□□□□ -1.01
CHD6-201ENST00000309279 CBX8Q9HC52 389 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.72□□□□□ -1.01
CHD6-201ENST00000309279 FNIP2Q9P278 1114 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 MTRRQ9UBK8 725 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 SEPT3Q9UH03 358 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 TTLL3Q9Y4R7 772 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 PCDHGC5Q9Y5F6 944 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 SNX9Q9Y5X1 595 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 BACE2Q9Y5Z0 518 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.72□□□□□ -1.01
CHD6-201ENST00000309279 GABRDO14764 452 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 RASA4O43374 803 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 HUS1O60921 280 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 LRRN2O75325 713 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 TACC1O75410 805 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 CNPP09543 421 aaKnown RBP8.72□□□□□ -1.01
CHD6-201ENST00000309279 MTHFD1P11586 935 aaKnown RBP8.72□□□□□ -1.01
CHD6-201ENST00000309279 IGFBP4P22692 258 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms