RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 PCDHB18PQ96TA0 734 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 AGPAT1Q99943 283 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 ARPC4-TTLL3A0A0A6YYG9 625 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 C15orf38-AP3S2A0A0A6YYH1 394 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 ARHGEF35A5YM69 484 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 I3L4J1 428 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 TBC1D12O60347 775 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 TMEM253P0C7T8 217 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 OTUD4Q01804 1114 aaKnown RBP10.89□□□□□ -0.67
MSRB3-201ENST00000308259 DGKZQ13574 1117 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 ARPINQ7Z6K5 226 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 SLC47A2Q86VL8 602 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 UTP4Q969X6 686 aaKnown RBP10.89□□□□□ -0.67
MSRB3-201ENST00000308259 C9orf72Q96LT7 481 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 C10orf88Q9H8K7 445 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 IFT122Q9HBG6 1241 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 DAPK2Q9UIK4 370 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 CHKBQ9Y259 395 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 COL24A1Q17RW2 1714 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 NHSQ6T4R5 1651 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 RNASEH1O60930 286 aaKnown RBP10.89□□□□□ -0.67
MSRB3-201ENST00000308259 ESRRBO95718 433 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 DLATP10515 647 aaKnown RBP10.89□□□□□ -0.67
MSRB3-201ENST00000308259 ATXN3P54252 364 aaPredicted RBP10.89□□□□□ -0.67
MSRB3-201ENST00000308259 PTENP60484 403 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 BFSP1Q12934 665 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 TAS2R42Q7RTR8 314 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 PRELID2Q8N945 189 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 GDPD5Q8WTR4 605 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 DHX38Q92620 1227 aaKnown RBP10.89□□□□□ -0.67
MSRB3-201ENST00000308259 GATA6Q92908 595 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 PRMT6Q96LA8 375 aaPredicted RBP10.89□□□□□ -0.67
MSRB3-201ENST00000308259 ZDHHC15Q96MV8 337 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 GLIS2Q9BZE0 524 aaPredicted RBP10.89□□□□□ -0.67
MSRB3-201ENST00000308259 GJB6O95452 261 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 CYP3A4P08684 503 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 ENDOUP21128 410 aaKnown RBP10.89□□□□□ -0.67
MSRB3-201ENST00000308259 EPHX2P34913 555 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 PPARGP37231 505 aaPredicted RBP10.89□□□□□ -0.67
MSRB3-201ENST00000308259 ENTPD1P49961 510 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 SOX10P56693 466 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 SULT2A1Q06520 285 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 CDC16Q13042 620 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 BMT2Q1RMZ1 405 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 ZDHHC24Q6UX98 284 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 PACS1Q6VY07 963 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 VPS37AQ8NEZ2 397 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 OSCP1Q8WVF1 389 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 ATG4AQ8WYN0 398 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 SLC35B4Q969S0 331 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 TTC17Q96AE7 1141 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 MRIQ9BWK5 157 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 CCSER2Q9H7U1 834 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 SPC25Q9HBM1 224 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 TOPORSQ9NS56 1045 aaPredicted RBP10.89□□□□□ -0.67
MSRB3-201ENST00000308259 ZDHHC18Q9NUE0 388 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 GGA3Q9NZ52 723 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 VPS51Q9UID3 782 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 TEX28O15482 410 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 ZBTB11O95625 1053 aaPredicted RBP10.88□□□□□ -0.67
MSRB3-201ENST00000308259 FOSP01100 380 aaPredicted RBP10.88□□□□□ -0.67
MSRB3-201ENST00000308259 CYP1A1P04798 512 aaPredicted RBP10.88□□□□□ -0.67
MSRB3-201ENST00000308259 MCF2P10911 925 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 CDK4P11802 303 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 MXI1P50539 228 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 KRT76Q01546 638 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 HIC1Q14526 733 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 CARTPTQ16568 116 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 GALNTL6Q49A17 601 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 NADK2Q4G0N4 442 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 TMTC4Q5T4D3 741 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 PPP2R2DQ66LE6 453 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 DUPD1Q68J44 220 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 CCDC137Q6PK04 289 aaKnown RBP10.88□□□□□ -0.67
MSRB3-201ENST00000308259 CLVS1Q8IUQ0 354 aaPredicted RBP10.88□□□□□ -0.67
MSRB3-201ENST00000308259 DAW1Q8N136 415 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 SHCBP1LQ9BZQ2 653 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 GOLGA8RI6L899 631 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 CES2O00748 559 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 KIAA0391O15091 583 aaKnown RBP10.88□□□□□ -0.67
MSRB3-201ENST00000308259 PEX1O43933 1283 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 RAP1GDS1P52306 607 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 MAPK10P53779 464 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 NUP107P57740 925 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 ANGEL2Q5VTE6 544 aaKnown RBP10.88□□□□□ -0.67
MSRB3-201ENST00000308259 PRUNE1Q86TP1 453 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 SAMD3Q8N6K7 520 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 RFWD2Q8NHY2 731 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 PLEKHO2Q8TD55 490 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 MKL1Q969V6 931 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 CCDC28BQ9BUN5 200 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 CADM1Q9BY67 442 aaKnown RBP10.88□□□□□ -0.67
MSRB3-201ENST00000308259 NOL6Q9H6R4 1146 aaKnown RBP10.88□□□□□ -0.67
MSRB3-201ENST00000308259 INIPQ9NRY2 104 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 FAIMQ9NVQ4 179 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 C1orf232A0A0U1RR37 186 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 TBX3O15119 743 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 SERPINI2O75830 405 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 PSMD10O75832 226 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 ZBED1O96006 694 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms