RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ZNF419Q96HQ0 510 aaPredicted RBP12.69□□□□□ -0.38
SMIM4-201ENST00000307106 ACBD6Q9BR61 282 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 ASB7Q9H672 318 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 DDX43Q9NXZ2 648 aaKnown RBP12.69□□□□□ -0.38
SMIM4-201ENST00000307106 C2CD2Q9Y426 696 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 A0A0B4J269 797 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 ZBTB24O43167 697 aaPredicted RBP12.68□□□□□ -0.38
SMIM4-201ENST00000307106 JAK2O60674 1132 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 NDUFS2O75306 463 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 ATXN1LP0C7T5 689 aaKnown RBP12.68□□□□□ -0.38
SMIM4-201ENST00000307106 ADH5P11766 374 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 MAOBP27338 520 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 WASP42768 502 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 CAMK2BQ13554 666 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 LARP1BQ659C4 914 aaKnown RBP12.68□□□□□ -0.38
SMIM4-201ENST00000307106 SPATA2LQ8IUW3 424 aaPredicted RBP12.68□□□□□ -0.38
SMIM4-201ENST00000307106 PHTF2Q8N3S3 785 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 ZNF843Q8N446 348 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 PDCL2Q8N4E4 241 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 C4orf32Q8N8J7 132 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 KIAA1958Q8N8K9 716 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 KCNV2Q8TDN2 545 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 GTF3C6Q969F1 213 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 ZNF560Q96MR9 790 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 PKMYT1Q99640 499 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 LARSQ9P2J5 1176 aaKnown RBP12.68□□□□□ -0.38
SMIM4-201ENST00000307106 GTF3C4Q9UKN8 822 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 COL6A6A6NMZ7 2263 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 MYO18BQ8IUG5 2567 aa12.68□□□□□ -0.38
SMIM4-201ENST00000307106 A0A1W2PQF6 199 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 FAM149AA5PLN7 773 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 TBC1D3BA6NDS4 549 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 GOLGA8CPA6NN73 597 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 DKK1O94907 266 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 PIGRP01833 764 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 NDUFV2P19404 249 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 ITPKBP27987 946 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 ACOT2P49753 483 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 SLC7A9P82251 487 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 MYL7Q01449 175 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 ME3Q16798 604 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 CCDC142Q17RM4 750 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 CFAP221Q4G0U5 840 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 WDR45BQ5MNZ6 344 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 PDCD7Q8N8D1 485 aaKnown RBP12.67□□□□□ -0.38
SMIM4-201ENST00000307106 LSM14AQ8ND56 463 aaKnown RBP12.67□□□□□ -0.38
SMIM4-201ENST00000307106 BAHD1Q8TBE0 780 aaPredicted RBP12.67□□□□□ -0.38
SMIM4-201ENST00000307106 FOXJ1Q92949 421 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 KCNN1Q92952 543 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 KIF2CQ99661 725 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 RNF38Q9H0F5 515 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 PRORYQ9H606 182 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 PRDM16Q9HAZ2 1276 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 IL21RQ9HBE5 538 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 CD93Q9NPY3 652 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 TM7SF3Q9NS93 570 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 SMPD4Q9NXE4 827 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 TRPM5Q9NZQ8 1165 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 L1RE1Q9UN81 338 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 CPQQ9Y646 472 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 ZNF462Q96JM2 2506 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 CKAP5Q14008 2032 aa12.67□□□□□ -0.38
SMIM4-201ENST00000307106 A0A1B0GTW7 788 aa12.66□□□□□ -0.38
SMIM4-201ENST00000307106 J3QKU1 62 aa12.66□□□□□ -0.38
SMIM4-201ENST00000307106 CER1O95813 267 aa12.66□□□□□ -0.38
SMIM4-201ENST00000307106 ZNF883P0CG24 379 aa12.66□□□□□ -0.38
SMIM4-201ENST00000307106 NTSR1P30989 418 aa12.66□□□□□ -0.38
SMIM4-201ENST00000307106 NUMA1Q14980 2115 aa12.66□□□□□ -0.38
SMIM4-201ENST00000307106 ANKRD1Q15327 319 aa12.66□□□□□ -0.38
SMIM4-201ENST00000307106 ZRSR1Q15695 479 aaKnown RBP12.66□□□□□ -0.38
SMIM4-201ENST00000307106 LY6G5CQ5SRR4 150 aa12.66□□□□□ -0.38
SMIM4-201ENST00000307106 C10orf76Q5T2E6 689 aa12.66□□□□□ -0.38
SMIM4-201ENST00000307106 SLC39A4Q6P5W5 647 aa12.66□□□□□ -0.38
SMIM4-201ENST00000307106 CENPQQ7L2Z9 268 aaPredicted RBP12.66□□□□□ -0.38
SMIM4-201ENST00000307106 NAT16Q8N8M0 369 aa12.66□□□□□ -0.38
SMIM4-201ENST00000307106 SYT2Q8N9I0 419 aaPredicted RBP12.66□□□□□ -0.38
SMIM4-201ENST00000307106 RHBDD1Q8TEB9 315 aa12.66□□□□□ -0.38
SMIM4-201ENST00000307106 IPO4Q8TEX9 1081 aaKnown RBP12.66□□□□□ -0.38
SMIM4-201ENST00000307106 ERLEC1Q96DZ1 483 aa12.66□□□□□ -0.38
SMIM4-201ENST00000307106 FUBP3Q96I24 572 aaKnown RBP eCLIP12.66□□□□□ -0.38
SMIM4-201ENST00000307106 CDC6Q99741 560 aa12.66□□□□□ -0.38
SMIM4-201ENST00000307106 GAREM1Q9H706 876 aa12.66□□□□□ -0.38
SMIM4-201ENST00000307106 CFAP97Q9P2B7 532 aa12.66□□□□□ -0.38
SMIM4-201ENST00000307106 NPHP3-ACAD11A0A0J9YXS1 232 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 MEI4A8MW99 385 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 K7ENM7 598 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 CAPN9O14815 690 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 FLRT2O43155 660 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 HUS1O60921 280 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 CILPO75339 1184 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 TULP3O75386 442 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 OLFM2O95897 454 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 PNPLA4P41247 253 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 MATKP42679 507 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 SLC12A3P55017 1021 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 USP46P62068 366 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 GAD2Q05329 585 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 PREPLQ4J6C6 727 aaPredicted RBP12.65□□□□□ -0.38
SMIM4-201ENST00000307106 BTBD8Q5XKL5 378 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 DENND5BQ6ZUT9 1274 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms