RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 CASTOR2A6NHX0 329 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 BEST1O76090 585 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 KRT7P08729 469 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 GHRP10912 638 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 TAF6P49848 677 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 FCGRTP55899 365 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 KCNA10Q16322 511 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 C1orf228Q6PIY5 440 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 CYP4V2Q6ZWL3 525 aaPredicted RBP11.94□□□□□ -0.5
SCG2-201ENST00000305409 ADGRF2Q8IZF7 708 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 NETO2Q8NC67 525 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 FAM172AQ8WUF8 416 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 TRAIPQ9BWF2 469 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 ASNSD1Q9NWL6 643 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 COX16Q9P0S2 106 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 FEZ2Q9UHY8 353 aaPredicted RBP11.94□□□□□ -0.5
SCG2-201ENST00000305409 M0QZ92 97 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 HUS1O60921 280 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 PIAS1O75925 651 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 CD4P01730 458 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 AXLP30530 894 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 CD52P31358 61 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 VCPP55072 806 aaKnown RBP11.93□□□□□ -0.5
SCG2-201ENST00000305409 GJA9P57773 515 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 FASTKD3Q14CZ7 662 aaKnown RBP11.93□□□□□ -0.5
SCG2-201ENST00000305409 KDM7AQ6ZMT4 941 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 ALLCQ8N6M5 410 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 CCDC89Q8N998 374 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 GSTCDQ8NEC7 633 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 FNIP1Q8TF40 1166 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 HASPINQ8TF76 798 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 MRRFQ96E11 262 aaKnown RBP11.93□□□□□ -0.5
SCG2-201ENST00000305409 FAXDC2Q96IV6 333 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 PPANQ9NQ55 473 aaKnown RBP11.93□□□□□ -0.5
SCG2-201ENST00000305409 XPNPEP3Q9NQH7 507 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 HOMER3Q9NSC5 361 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 TRMT13Q9NUP7 481 aaKnown RBP11.93□□□□□ -0.5
SCG2-201ENST00000305409 RNF186Q9NXI6 227 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 RSPH14Q9UHP6 348 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 Q9Y3F1 56 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 CYB561D2O14569 222 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 PRPSAP2O60256 369 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 SHOX2O60902 331 aaPredicted RBP11.93□□□□□ -0.5
SCG2-201ENST00000305409 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
SCG2-201ENST00000305409 KCNE1P15382 129 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 HOXC8P31273 242 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 NDUFV1P49821 464 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 SCNN1GP51170 649 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 SLMAPQ14BN4 828 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 OASLQ15646 514 aaKnown RBP11.93□□□□□ -0.5
SCG2-201ENST00000305409 PPP6R3Q5H9R7 873 aaPredicted RBP11.93□□□□□ -0.5
SCG2-201ENST00000305409 KIAA0319Q5VV43 1072 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 POLNQ7Z5Q5 900 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 UNC45BQ8IWX7 931 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 FAM71DQ8N9W8 422 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 C3orf58Q8NDZ4 430 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 BCAS4Q8TDM0 211 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 CNPY3Q9BT09 278 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 FAM105AQ9NUU6 356 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 TBK1Q9UHD2 729 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 KIAA1257Q9ULG3 409 aa11.93□□□□□ -0.5
SCG2-201ENST00000305409 EIF3HO15372 352 aaKnown RBP eCLIP11.92□□□□□ -0.5
SCG2-201ENST00000305409 NUDT17P0C025 328 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 CLCNKBP51801 687 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 SKOR1P84550 965 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 SLC6A3Q01959 620 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 ADCY1Q08828 1119 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 TAF2Q6P1X5 1199 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 NME8Q8N427 588 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 SELENOSQ9BQE4 189 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 SLC4A5Q9BY07 1137 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 TMPRSS4Q9NRS4 437 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 NINJ2Q9NZG7 142 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 TRPV2Q9Y5S1 764 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.92□□□□□ -0.5
SCG2-201ENST00000305409 RGS16O15492 202 aaPredicted RBP11.92□□□□□ -0.5
SCG2-201ENST00000305409 MGEA5O60502 916 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 POMCP01189 267 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 CREB1P16220 341 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 GBP1P32455 592 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 TM4SF4P48230 202 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 CCT5P48643 541 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 COPS2P61201 443 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 PITX1P78337 314 aaPredicted RBP11.92□□□□□ -0.5
SCG2-201ENST00000305409 KRT81Q14533 505 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 ANKRD22Q5VYY1 191 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 SYDE1Q6ZW31 735 aaPredicted RBP11.92□□□□□ -0.5
SCG2-201ENST00000305409 TMEM110Q86TL2 294 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 CMASQ8NFW8 434 aaPredicted RBP11.92□□□□□ -0.5
SCG2-201ENST00000305409 SLC35B2Q8TB61 432 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 MAK16Q9BXY0 300 aaKnown RBP11.92□□□□□ -0.5
SCG2-201ENST00000305409 SPC25Q9HBM1 224 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 CALCOCO1Q9P1Z2 691 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 INPP5FQ9Y2H2 1132 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 HEY1Q9Y5J3 304 aa11.92□□□□□ -0.5
SCG2-201ENST00000305409 TCRBV7S3A2A0A539 114 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 TMEM88BA6NKF7 163 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 RASGRF2O14827 1237 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 SEPT4O43236 478 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 CHRM1P11229 460 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms